Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973355
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Entry
101973355 CDS
T10664
Symbol
Nhlrc1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1 isoform X1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101973355 (Nhlrc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101973355 (Nhlrc1)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101973355 (Nhlrc1)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101973355 (Nhlrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
Baculo_IE-1
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
101973355
NCBI-ProteinID:
XP_005329201
UniProt:
I3MZ17
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MGEEASGGGGTPRELVREAEIGLLECKVCFERFGHSQQRRPRNLACGHVVCLACVAALAH
PRTLALECPFCRRACRACDTSDCLPVLHLLELLGSTLHRSPAAPCAAPCIPGALSCHHAF
GGWGTLVNPTGLALCPKTGRVVVVHDGKRRVKIFDSGGGCVHQFGEKGDAAQDIRYPLDV
TVTSDCHVVVTDAGDRSVKVFDFFGQIKLVMGGQFSLPWGVETTPQNGVLVTDAEGGSLH
LLEVDFLEGALQRTERLQAHLSSPRGVAVSWLTGAVAVLEHPWALGPGACSSRVKVFSSS
MQLIGQVDTFGLSLFFPSRVTASAVTFDHQGNVVVTDTSGPAILCLGKPEEFPGLKPMVT
EGLSHPVALTFTKENSLLVLDTASHSVKVYKADWG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggaggcctcgggcggcggggggacgccgcgggagctggtgcgcgaggccgag
atcggcctgctcgagtgcaaggtgtgctttgagaggttcggccacagccagcagcggcgc
ccgcgcaacctggcctgcggccacgtggtctgcctggcctgcgtggccgccctggcacac
ccgcggaccctggccctcgagtgccccttctgccggcgagcctgccgcgcctgcgacacc
agcgactgcctgccggtgctgcacctgctggagctcctgggctccacccttcaccggtcc
ccagccgccccctgcgccgccccctgcatccccggggcccttagctgccaccacgccttt
ggcgggtgggggaccctggtcaaccccacgggtctggcactttgtcccaagacgggacgg
gtcgtggtggtgcacgatggcaagaggcgggtcaagatctttgactcagggggaggatgt
gtgcatcaatttggagagaaaggtgacgccgcccaagacattaggtacccactggacgtc
accgtcaccagtgactgccacgtggttgtcaccgacgctggcgaccgctccgtcaaagtg
tttgatttttttggccagatcaagctcgtcatgggaggccagttctccttaccttggggt
gtggagaccacccctcagaatggggtcctggtaaccgatgcggaaggagggtctctgcac
ctgctggaagtcgacttcctggaaggagcccttcagagaacagaaaggttgcaagctcat
ctgagcagcccccgaggggtggcagtgtcttggctcactggggctgtggccgtcctagag
cacccgtgggccctgggacccggggcctgcagtagcagggtgaaggtgtttagctcaagt
atgcaactgatcggccaggtggatacctttgggctgagcctcttctttccctccagagtt
actgcttcagctgtgacctttgatcaccaggggaatgtggtggtgacagatacctcgggt
ccagctatcctgtgcctaggaaaacctgaagagttcccaggattgaagcccatggtcact
gagggcctttcccatcctgtggcactgaccttcaccaaggagaattctcttcttgtgctg
gacactgcatctcattctgtgaaagtctataaagctgactgggggtaa
DBGET
integrated database retrieval system
