Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973441
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Entry
101973441 CDS
T10664
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04082
Neuroactive ligand signaling
iti04721
Synaptic vesicle cycle
iti04726
Serotonergic synapse
Brite
Transporters [BR:
iti02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101973441 (Slc6a4)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101973441
NCBI-ProteinID:
XP_021583815
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Position
Unknown
AA seq
630 aa
AA seq
DB search
METTPLNSQKVLSACKDGEDCQKNGVLQKGVPTTEERPESGQRSNGYSAVPSPSAGDDTP
NSMPAATTTLMAEVHQGERETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILSILLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSLVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLAVVVTCFIGSLVT
LTFGGAYVVKLLEEYATGPAVLTVVLIEAVAVSWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPMFLLFIICSFLMSPPQLRLFQYNYPHWSVILGYCIGTSSFICIPTYITYRLIIT
PGTFKERIIKSITPETPTEIPCGDIRLNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgcccttgaattctcagaaggtgctgtcagcctgtaaggatggagaggat
tgtcagaaaaatggagtgttgcagaagggtgtccccaccacagaggaaagacccgagtct
ggccaaaggtccaatgggtactctgcagttccgagccctagcgcaggagatgacactcct
aactctatgccagctgccaccaccaccctaatggcagaggttcatcagggggaacgggag
acctggggcaagaagatggatttcctcctctcagtcattggttatgctgtggacctgggc
aacgtctggcgctttccctacatatgctaccagaatggaggaggggcgttccttctcccc
tacaccatcatggccattttcgggggaattccactattttacatggagcttgcactgggc
cagtaccaccgaaatggatgcatttctatatggaggaaaatctgcccaattttcaaaggg
atcggctatgccatctgcatcattgccttttacattgcctcctactacaacacgatcatg
gcctgggcactctactacctcatctcctccttcacggatcagctgccctggaccagctgc
aagaattcctggaacactggcaactgcaccaactatttctcagaggacaatatcacctgg
acactccattccacatctcctgctgaagaattttacacgcgccatgtcctgcagatccac
cggtctaagggactccaggacctggggggcatcagctggcagcttgccctctgcatcatg
ctcatcttcaccattatctacttcagcatctggaaaggtgtcaaaacttctggcaaggtg
gtatgggtgacagctacctttccttacatcatcctttctatcctgctggtgaggggggcc
accctccctggagcctggaggggtgtcctcttctacttgaaacccaactggcagaaactc
ctggaaacaggggtgtggatcgatgctgctgctcagatctttttctctcttggtccaggc
ttcggagtcctcctggcttttgctagctacaacaagttcaacaacaactgttaccaagat
gccctggtgaccagtttggtcaactgcatgaccagctttgtttcgggatttgtcatcttc
actgtgctcgggtacatggctgagatgaggaatgaagatgtatcagaggtggccaaagat
gcaggacccagcctcctcttcatcacatatgcagaagccatagccaacatgcctgcatcc
acattttttgccatcatcttcttcctcatgctgatcacactgggcctggacagcacattt
gcaggcttggagggtgtgatcacggctgtgctagatgagtttccacacatctgggccaag
cgccgggagtggtttgtgcttgctgtggtggttacttgcttcattggatccctggtcacc
ctgacttttggaggggcctatgtggtgaagctgctggaagaatatgccacaggtcccgcg
gtgctcaccgtcgtgcttatagaagcagtggctgtgtcttggttctatggtatcactcag
ttttgcagtgatgtgaaggaaatgcttggcttcagccctggatggttttggaggatctgc
tgggtagccatcagccctatgtttctcctgttcatcatttgcagttttttgatgagccca
ccccagctacgactttttcaatataattatcctcactggagtgtcatcctgggttactgc
ataggaacttcatctttcatctgcatcccgacgtatataacttatcggctgatcatcact
ccagggacttttaaggagcgaattattaaaagtattactccagaaacaccaacagaaatt
ccctgcggggacatccgcttgaatgctgtgtaa
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