KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973510
Entry
101973510         CDS       T10664                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03022  Basal transcription factors
iti05016  Huntington disease
iti05017  Spinocerebellar ataxia
iti05165  Human papillomavirus infection
iti05166  Human T-cell leukemia virus 1 infection
iti05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101973510
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    101973510
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    101973510
   05165 Human papillomavirus infection
    101973510
  09164 Neurodegenerative disease
   05016 Huntington disease
    101973510
   05017 Spinocerebellar ataxia
    101973510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:iti03000]
    101973510
   03021 Transcription machinery [BR:iti03021]
    101973510
Transcription factors [BR:iti03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    101973510
Transcription machinery [BR:iti03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     101973510
  RNA polymerase III system
    TFIIIB
     101973510
  RNA polymerase I system
    SL1/TIF-1B
     101973510
SSDB
Motif
Pfam: TBP TFIIA EPL1 DUF7518 Presenilin VPS13_N
Other DBs
NCBI-GeneID: 101973510
NCBI-ProteinID: XP_005342550
UniProt: I3MBK6
LinkDB
Position
Unknown
AA seq 323 aa
MDQNSSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ
QQQQQQQQQQQQQQQQQQQQVVAAAAQQSAPQQPAQGASGQTPQLFHSQTLTTAPLPGTT
PLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKR
FAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQ
NMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAK
VRAEIYEAFENIYPILKGFRKTT
NT seq 972 nt   +upstreamnt  +downstreamnt
atggatcagaacagcagcctgccaccgtatgcccagggcttggcctccccccagggtgcc
atgacgcctgggatccccatttttagtcccatgatgccttatggcacgggcctgacgccc
cagcctattcagaacaccaacagcctgtctattttggaagaacagcagagacagcagcag
cagcagcaacagcagcaacaacaacagcagcagcagcagcagcagcagcagcaacaacag
gtggtggccgcagcagcgcagcagtcagcaccccagcagccggcacagggggcctccggc
cagaccccacagctgttccactcacagactcttaccactgcacccttgccgggcaccacg
cccctgtatccctccccgatgacccccatgactcccatcactcctgccacaccagcctcg
gagagctctgggattgtgccacagctgcaaaatatagtatccacagtaaatcttggttgt
aaacttgacctgaagaccattgcacttcgtgctcgaaatgctgaatataaccccaagcgg
tttgcagccgtaatcatgaggatacgggagccgcggaccacagcactcatcttcagctct
gggaaaatggtgtgcacaggagccaagagtgaagaacagtccagactagcagcaagaaag
tatgccagagttgtgcagaagttgggtttccccgcgaagttcttagatttcaagatccag
aacatggtggggagctgtgatgtgaagttccccataaggctggaaggcctcgtgctcact
caccagcagttcagcagttatgagccagagctatttcctggattaatctacagaatgatc
aaacccagaattgtgctccttatctttgtttctgggaaggttgtgttaacaggtgctaaa
gtcagagcagaaatttatgaagcgtttgagaacatctaccccattctgaagggattcagg
aagactacgtag

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