KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973621
Entry
101973621         CDS       T10664                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27-like
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101973621
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:iti03041]
    101973621
   03400 DNA repair and recombination proteins [BR:iti03400]
    101973621
Spliceosome [BR:iti03041]
 Complex B
  Other components
   Prp19 complex
    101973621
 Complex C
   Prp19-CDC5 complex
    101973621
DNA repair and recombination proteins [BR:iti03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    101973621
SSDB
Motif
Pfam: BCAS2 THOC7 Beta-prop_NUP159_NUP214 MerR-DNA-bind SCRG1
Other DBs
NCBI-GeneID: 101973621
NCBI-ProteinID: XP_040131687
LinkDB
Position
Unknown
AA seq 225 aa
MAGTGLVAGEVVVDALPYFDQGYEAPGMREVAAVLVEEETRRYRPTKNYLSYLTAPDYSA
FETDIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVYNENQVHMIEHSQKELQKLRKHIQDLNWQRKNMQLTAGSKLRE
MESNWVSLVSKNYEIERTIVQLENEIFQIKQQNGEANKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgggcacagggctagtggccggggaggttgtggtggacgcgcttccatattttgat
caaggttatgaagcgcctggcatgcgagaagtggctgcagtgttggtggaggaggaaact
cgcagataccgacctaccaagaactacttgagctacctcacagccccggattattctgcg
tttgaaactgacataatgagaaatgaatttgaaagactggctgcccgacaaccaattgaa
ttgctcagtatgaaacgatatgaacttccagccccttcctctggtcagaaaaatgacatt
accgcttggcaagaatgtgtaaacaattctatggcccagttagagcatcaggcagttcga
attgagaatctggaactaatgtctcagcatggatgtaatgcctggaaagtatataatgaa
aatcaagtccatatgattgaacactcacagaaagagcttcagaagttaaggaaacatatt
caggacttaaactggcagcgaaagaacatgcaacttacagctggatctaaattaagagaa
atggagtcaaattgggtatccctggtcagtaagaattatgaaattgaacggactattgtg
caactagaaaatgaaatctttcaaattaagcagcaaaatggagaggcaaacaaagaaaac
atccgacaagatttctga

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