KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973801
Entry
101973801         CDS       T10664                                 
Symbol
Psmb1
Name
(RefSeq) proteasome subunit beta type-1
  KO
K02732  20S proteasome subunit beta 6 [EC:3.4.25.1]
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03050  Proteasome
iti05010  Alzheimer disease
iti05012  Parkinson disease
iti05014  Amyotrophic lateral sclerosis
iti05016  Huntington disease
iti05017  Spinocerebellar ataxia
iti05020  Prion disease
iti05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    101973801 (Psmb1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    101973801 (Psmb1)
   05012 Parkinson disease
    101973801 (Psmb1)
   05014 Amyotrophic lateral sclerosis
    101973801 (Psmb1)
   05016 Huntington disease
    101973801 (Psmb1)
   05017 Spinocerebellar ataxia
    101973801 (Psmb1)
   05020 Prion disease
    101973801 (Psmb1)
   05022 Pathways of neurodegeneration - multiple diseases
    101973801 (Psmb1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:iti01002]
    101973801 (Psmb1)
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:iti03051]
    101973801 (Psmb1)
Enzymes [BR:iti01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.25  Threonine endopeptidases
    3.4.25.1  proteasome endopeptidase complex
     101973801 (Psmb1)
Peptidases and inhibitors [BR:iti01002]
 Threonine peptidases
  Family T1: proteasome family
   101973801 (Psmb1)
Proteasome [BR:iti03051]
 Eukaryotic proteasome
  Core particles (20S proteasome)
   beta type subunits
    101973801 (Psmb1)
SSDB
Motif
Pfam: Proteasome Cytochrom_C1 FAM165
Other DBs
NCBI-GeneID: 101973801
NCBI-ProteinID: XP_005342551
UniProt: I3MFR9
LinkDB
Position
Unknown
AA seq 240 aa
MSSAVSSWGCGGQPEMEALGAAGPWRLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGF
SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLS
TILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV
GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD
NT seq 723 nt   +upstreamnt  +downstreamnt
atgtcgtccgcagtctcgtcctggggttgcggcgggcagccggagatggaggcgctgggc
gccgcgggtccctggcggctgcgcttctcgccctacgccttcaacggaggtactgtattg
gcaattgctggtgaagacttttcgattgttgcttctgacactcggctcagtgaaggcttt
tctattcacactcgggacagccccaaatgttacaagttaacagacaaaacagtcattgga
tgtagcggttttcatggagactgccttaccctgacaaagattattgaagcaagactgaag
atgtacaagcattccaataataaggccatgacaacgggggccattgctgcgatgctgtct
accatcctgtactcaaggcgcttcttcccatactatgtctacaacatcatcggtggactc
gatgaagaaggaaagggagctgtgtacagctttgacccagtaggctcctaccagagagac
tccttcaaggctggaggctcagccagtgctatgctgcagcccctgctcgacaaccaggtt
ggtttcaagaacatgcaaaacgtggagcatgtgccattgtctttggacagagccatgagg
ctggtgaaagatgtcttcatttctgcagctgagagggacgtatacaccggggatgccctc
aggatctgcattgtgaccaaagagggaatccgggaggagactgttccccttcggaaggac
tga

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