Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973922
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Entry
101973922 CDS
T10664
Symbol
Smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03082
ATP-dependent chromatin remodeling
iti04714
Thermogenesis
iti05225
Hepatocellular carcinoma
Brite
Transcription machinery [BR:
iti03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101973922 (Smarcd2)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101973922 (Smarcd2)
PBAF complex
101973922 (Smarcd2)
GBAF(ncBAF) complex
101973922 (Smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101973922
NCBI-ProteinID:
XP_005328261
UniProt:
I3MCN3
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All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGAGVRPGPAFWGSGPAGGVGGPGTAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPTGSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQAQPPIPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDSTGTAGTPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgccccctctgagtcccggcggcggcgcc
gtggctgcggccctgggagcgccgcctcccccagcgggggccggggtgcgtcccggcccg
gcgttttggggctcggggcccgctggaggcgtggggggacccgggaccgccgccttccgc
cctatgggccccgcgggccccgctgctcagtaccagcggcctggcatgtccccagggagc
cggatgcccatggctggcttgcaggtgggaccccctactggctccccatttggtactgct
gctccacttcgacctggcatgccacccaccatgatggatccattccgaaaacgcctgctt
gtgccccaggcccagcccccgattcctgcccagcgccgggggttaaagaggaggaagatg
gcagataaggttctacctcagcgaattcgggagcttgtcccagagtctcaggcatacatg
gatctcttagcttttgagcggaagctggaccagaccattgctcgcaagcggatggagatc
caggaggccatcaaaaagcctctgacacaaaagcgaaagcttcggatctacatttccaat
acattcagtcccagcaaggcagaaggtgatagtacaggaactgcagggacccctggggga
actccagcaggggacaaggtggcttcctgggaactccgagtggagggaaaactgctggat
gatcctagcaaacagaagaggaagttttcttcattttttaagagtctcgtcattgagttg
gacaaggaactatatggacctgacaaccacctggtggagtggcaccgaatgcccaccacc
caggagacagatggcttccaggtgaaacgaccaggggacctaaatgtcaaatgcaccctc
ctgctcatgctggatcatcagcctccccagtataaactggaccctcggctggcaaggctg
ctgggagtgcacacacagacaagggctgccatcatgcaggccctgtggctttatatcaag
cacaatcagctgcaagatgggcatgagcgcgaatacatcaactgcaaccgttacttccgc
cagatcttcagctgtggccgactccgtttctctgagattcccatgaaactggctggattg
ctgcagcatccagatcccattgtcatcaaccacgtcatcagtgtggacccaaatgaccag
aagaagacagcctgttatgacatcgatgtggaggtggatgacccattgaaagctcagatg
agcaattttctggcctctaccactaaccagcaggagattgcctctttagacgtcaagatc
catgagaccattgagtccatcaaccagttgaagactcagagggatttcatgctcagcttt
agcactgacccccaggatttcatccaggaatggctccgttctcaacgccgagacctcaaa
atcatcactgatgtgatcggaaatcctgaggaagagagacgggctgctttctaccatcag
ccctgggcccaagaagcagtggggaggcacatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgttgggaattcgcctgacctaa
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integrated database retrieval system
