Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973929
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Entry
101973929 CDS
T10664
Symbol
Obsl1
Name
(RefSeq) obscurin-like protein 1 isoform X3
KO
K19574
obscurin-like protein 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
iti03036
]
101973929 (Obsl1)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
101973929 (Obsl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Izumo-Ig
Ig_MYOM1
C2-set_2
BiPBP_C
Ig_6
Ig_VEGFR-1-like_5th
C1-set
Ig_SEMA-3_4_7A
Unc5_NetrinR_N
Motif
Other DBs
NCBI-GeneID:
101973929
NCBI-ProteinID:
XP_005330578
LinkDB
All DBs
Position
Unknown
AA seq
1804 aa
AA seq
DB search
MKAGSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPTVVWEKGGQQLAASERLSF
PADGAEHGLLLSGALPTDAGVYVCRARNAAGEAYAAAAVTVLEPPAPEPEPQPAEHPLPP
PGTGEGAPVFLTGPRSQWVLRGEEVVLTCQVGGIPEPTLYWEKDGMALDEVWDSSHFVLE
PGRAAGGRGTSLALRILAARLPDSGVYVCHARNAHGHAQAGALLQVHQPPESPPEDPEEA
PAPVVEPLKCAPKTFWVNEGKHAKFRCYVMGKPEPEIEWHWEGRPLLPDRRRLMYRDRDG
GFVLKVLYCQAKDRGLYVCAARNSAGQTLSAVQLHVKEPRLRFTRPLQDVEGREHGIAVL
ECKVPNSRIPTAWFREDQRLLPCRKYEQIEEGTVRRLIIHRLKADDDGVYLCEMRGRVRT
VANVTVKGPILKRLPRKLDVLEGENAVLLVETREAGVEGRWSRDGEELPATCQSSSGHMH
ALVLPGVTREEAGEVTFSLGNSRTTTLLRVKCVKHNPPGPPVLAEMFKGHKNTVLLTWKP
PEPPPETPFIYRLERQEVGSEDWVQCFSIEKAGAVEVPGDCVPSEGDYRFRVCTVSEHGR
SPHVVFHGSAHLVPTARLVAGLEDVQVYDGEDAVFSLDLSTIIQGTWFLNGEELKVNKPE
GQVEPGALRYRMEQKGLQHRLILQAVKHEDSGALVGFSCPGVQDSAALTIQESPVHILSP
QDKVSLTFTTSERVVLTCELSRVDFPATWYKDGQKVEESESLVVKMDGRRHRLILPEAEV
RDSGEFECRTEGVSAFFSVTVQDPPVHIVDPQEHVFVHAITSECVMLTCEVDREDAPVRW
YKDGQEVEESDFVVLENEGPHHRLVLPAAQPPDGGEFQCVAGEERAYFTVTITDVSSWIV
YPSGKVYVAAVRLERVVLTCELCRPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAV
QLEDSGEYLCEIDDESASFTVTVTEPPVRIIYPRDEVTLIAVSLECVVLMCELSREDAPV
RWYKDGLEVEESEALVLESDGRYRRLVLPAAQPADGGEFVCDVGDDSAFFTVTVTAPPER
IVHPAARSLDLQFGAPGRVELRCEVAPAGSQVRWYKDGLEVEASDALQLGAEGPARTLTL
SHAQSEDAGEYVCETRDEAVTFNVSLTEPPVQFLAPEAAPSPLCVAPGEPVLLSCELSRA
SAPVFWSHNGRPVQEGQGLELQAEGPRRVLCIRAADLTHAGLYTCQTGTAPEAPSLSFTV
QVAEPPPVKLLSELTPLTVHEGDDATFQCEVSPPDAEVTWLRNGAVVTPGPQLEIARSGS
SHSLTVRGCKLEDSGTVAARAGSTVTSARLHVRETELLFLRRLQDVRAEEGQDVCLEVET
GRVGAAGAVRWLRGGEPLPLDSRLALAQDGHVHRLFIHGVVLADQGTYGCESHHDRTLAR
LSVRPRQLRVLQPLEDVTVSEGGSATFQLRLSQEGVIGEWARGGVRLQPGPKCHIHAEGH
THRLALSGLGLADSGCVSFTVDSLRCAARLTVREVPVTIVQGPQDLEVTEGDTATFECEL
SQALADVTWEKDGRALTPSPRLRLQALGTRRLLQLRRCSSSDAGTYSCVVGTAQAGPVRL
IVRERTVSVLSELQSVRAREGDGATFECTVSETETTGRWELGGRPLKPEGRVRIRQEGKK
HILVLSELRVEDAGEVRFQAGPAQSLALLEVEALPLQICRRPPREKTVLAGRRAVLEVTV
SRSRGHVCWLREGVELCPGDKYEMRSHGPTHSLVIHNVRPEDQGTYCCQAGQDSANTCLL
VEGE
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaggctcaggggatcaggggagtcccccgtgcttcctgcgcttcccgcggccc
gtgcgggtggtaagtggcgcggaggccgagctcaaatgcgtggtcctgggggagccgccg
cccactgtcgtgtgggagaaaggcgggcagcagctggcggcctcggagcgcctgagcttc
ccggcggacggcgccgagcatggcctgctgctgagcggcgcgctgcccaccgacgccggg
gtctacgtgtgccgcgctcgtaacgcggccggagaggcctacgcggcggccgcggtcacc
gtgctggagccgccggcccccgagcctgagccccaacccgccgagcacccgctgccgcct
cccggaaccggggagggcgccccggtgttcctgacgggaccccggtcccagtgggtgctg
cggggggaggaggtggtgctgacgtgccaagtggggggcatccccgaacccacgctgtac
tgggagaaggatgggatggccctggatgaggtgtgggacagcagtcacttcgtgctggag
cccggccgcgccgcgggtggccggggcactagcctggcgctgcgcatcctggcggcccgt
ctgccagactcgggcgtctacgtgtgccacgcccgcaacgcgcacggccacgcgcaggcc
ggcgcgctgctccaggtgcaccagccccccgagagcccgccggaggaccccgaggaggcc
cccgctccggtggtggagcctctcaagtgcgctcccaagaccttctgggtgaacgagggc
aagcacgccaagttccgctgctacgtgatgggcaagcctgagcccgagatcgaatggcac
tgggagggccgtcccctgcttcctgaccgccgccgcctcatgtaccgcgatcgcgatggc
ggctttgtgctcaaggtgctctactgccaggccaaggaccgcgggctctatgtctgcgcg
gctcggaactctgctggccaaacgctcagcgctgtgcagctgcacgtcaaagagccccgc
ctccgcttcacgaggcccctgcaggatgtggagggccgggagcatgggattgccgtgctg
gagtgtaaagtgcccaactcccgcattcccacagcctggttccgagaggaccagcggctg
ctgccctgccgcaagtatgaacagattgaagagggcaccgtcaggcgcctcatcatccac
aggctgaaggcagatgatgatggtgtctacctgtgcgagatgagaggccgggtgcgcaca
gtggccaatgtcacagttaaagggcccatactgaagaggctgccccggaagcttgatgtg
ctggagggagagaacgccgtgctgctggtggagacgcgagaggccggggttgaggggcgc
tggagccgtgacggggaggagctgccagccacctgccagagcagttctggtcacatgcac
gccctggtccttccaggggtcacccgagaagaagctggcgaggtcaccttcagcctaggc
aactcgcgcaccaccactctgctcagagtcaaatgtgtcaagcacaatcctccaggacct
ccggtgctggctgagatgttcaagggccacaagaacacggtcctactgacctggaagcct
cccgagccacctcctgagaccccctttatctaccgcctggagcggcaggaggtgggctct
gaagactgggtccagtgcttcagcattgagaaagctggagccgtggaggtgccaggcgac
tgtgtgccctcggagggtgactaccgtttccgcgtctgcacagttagcgaacatggccgc
agtccccacgtcgtgttccatggttctgctcaccttgtgcccacagctcgcctggtggca
ggtctggaggatgtgcaggtatacgatggggaagatgctgtcttctcccttgatctgtcc
accatcatccaggggacctggttccttaatggagaagaactcaaggttaacaagccagag
ggccaggtggagcctggggccctgaggtaccgaatggaacagaagggtctgcagcacaga
ctcatcctgcaagccgtcaagcacgaggacagtggggccctggttggcttcagctgccct
ggtgtacaggactcagctgccctcaccatccaagagagcccagtgcacatcctgagcccc
caagacaaggtgtcactgaccttcacgacctcggagcgggtggtgctgacctgtgagctc
tcgagagtagacttcccagcaacctggtacaaagatgggcagaaagtggaggagagcgag
tcgctggtggtgaagatggatgggcgcagacaccgtctaatcctgcctgaggctgaagtc
cgagacagcggcgagtttgaatgcagaacagaaggggtctcagccttcttcagtgtcact
gtccaagatcccccagtgcatatcgtggacccccaagagcatgtgtttgtacatgccata
acctctgagtgtgtcatgctgacctgtgaggtggaccgagaggacgcccctgtgcgctgg
tacaaggatgggcaggaggtggaggagagtgacttcgtggtactggagaatgaggggccc
catcatcgcctggtgctgcctgccgcccagccccctgacgggggcgagtttcagtgtgtc
gctggagaggagcgtgcctacttcactgtcaccatcacagatgtctcctcatggattgtg
taccccagcggcaaagtgtatgtagcagctgtgcgcctggagcgcgtggtactgacctgt
gagctgtgtcggccctgggccgaggtgcgctggaccaaggatggtgaggaggtggtagag
agcccagcactgcttctgcagaaggaggacactgtccgccgcctggtgctacctgctgtc
cagcttgaggactccggcgagtacttgtgtgaaattgatgacgaatctgcctccttcact
gtcacagtcacagaaccccccgtgaggatcatataccctcgggatgaggtgaccttgatc
gccgtgagcttggagtgtgtggtgctgatgtgtgagctgtctcgagaggacgccccagtg
cgctggtacaaggatggcctggaggtggaggagagcgaggcattggttctggagagtgat
ggccgctaccgccgcctggtgctgcccgctgcccagcctgcggacggaggcgagtttgtg
tgcgatgttggagatgactcagccttcttcacggtcactgtcacagccccaccagagagg
atcgtgcacccagcagcccgttccctggatctacagtttggagctccagggcgcgtggag
ctacgctgtgaggtggcccctgcggggtcccaggtgcgctggtacaaggacggcctggag
gtggaagcctcagatgccctgcagctgggtgctgaggggcctgcccgcaccctcaccctg
tcccatgcccagtctgaggatgccggggagtatgtgtgtgagacccgcgatgaggccgtc
accttcaacgtcagcctcactgagccccctgtgcagttccttgctccggaggcagccccc
agcccactctgtgtggcccctggggagccagtgctgctgagttgcgagctgtcccgggct
agcgcccctgtgttctggagccacaacgggaggcctgtgcaggagggccagggcctagag
ctccaagccgagggtccccgccgtgtcctctgcatccgggctgcagacctaacccatgca
ggtctctacacctgccagactgggactgccccagaggccccaagcctcagcttcaccgtc
caggtggctgagccacctccagtgaaacttctctctgagctgacgccattaacggtccat
gagggcgacgacgccacgttccagtgcgaagtctcaccaccagatgcagaagtcacctgg
ctacgcaatggggccgtcgtcactccagggccccagctggagatagcccggagcggctca
agccactctctgactgtgcgaggctgcaagctcgaggactcggggacagtggctgcacgg
gcagggagcaccgtcacaagtgctcggctgcatgtccgagagacggagctgctgttcctg
cggcggctgcaggacgtgcgcgccgaggaaggccaggacgtgtgcctggaggtggagacc
ggccgggtgggcgccgcgggggccgttcgctggctgcgaggcggggagcccctcccgctc
gactcccgcctggccctggcccaggacggccacgtccaccgcctcttcatccacggcgtc
gtgctcgccgaccagggcacctacggctgcgagagccaccacgatcgcaccctggccagg
ctcagtgtgaggccgcggcagctgagagtcctgcagcctctggaagatgtgacagtcagc
gaggggggcagcgccaccttccagctgcggctgtcccaggagggtgtgattggggagtgg
gcccggggtggagtccggctgcagccggggcccaagtgccacattcatgcggagggccac
actcaccgtctggcacttagtggcctgggcctggcagactcgggctgtgtctccttcacg
gtggattccctgcgctgtgctgccagactcactgtgagagaggtcccagtgaccattgtg
caggggccacaggacctagaggtgacagagggagacacagctacattcgagtgcgagctt
tcccaggccttggctgatgttacctgggagaaggacgggcgcgcgctcacccccagcccc
cggctccggctccaggccctcgggacgcgccgccttctccagctgcggcgctgcagttcc
tcggacgccgggacctacagctgtgtggtggggacggcccaggccgggccggttcgtctg
atcgtgcgcgagcgcacagtgtcggtgctttccgagctccagtccgtgcgcgcccgcgaa
ggcgacggcgccacgttcgagtgtacggtgtcagagaccgagaccaccgggcgctgggag
ctcggaggccgcccgctaaaacccgaaggccgcgtccgcatccgacaggaagggaagaaa
cacattctggtgctgagcgagctgcgagtcgaggacgcgggtgaagtccgcttccaggcg
ggacccgcccagtccttggctctgctggaggtggaggcattgcctctccagatatgccgc
cgcccccctcgcgagaagactgttcttgccggccgccgggcggtgctggaggtgaccgtg
tcccgctccaggggccacgtgtgctggttgcgggagggggtcgagctgtgcccaggagac
aagtatgagatgcgcagccacggccccacccacagcctggtcatccataacgtgagacca
gaggaccagggcacttactgctgccaggccggccaggacagtgccaacacatgcctgctg
gtagagggtgagtaa
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