Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973960
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Entry
101973960 CDS
T10664
Symbol
Rab11fip1
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101973960 (Rab11fip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101973960 (Rab11fip1)
Membrane trafficking [BR:
iti04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
101973960 (Rab11fip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
101973960
NCBI-ProteinID:
XP_005338436
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MSLAASAGRGPGAVWSPTHVQVTVLQARGLRAKGPGGTSDAYAVIQVGKEKYATSVSERS
LGAPVWREEATFELPPLLSSGAVPAAAATLQLTVLHRALLGLDKFLGRAEVDLRELHRDQ
GRRKTQWYILKSKPGKKDKERGEIEVDIQFMRNNMTASMFDLSVKDKSRNPFGKLKDKIK
GKNKDSVSETTSAIVPSMSPSVDSDDESFSKDKKKKSKIKTLFSKSNLQKTPLSQSMSVL
PTSKPDKVLLRPGDFQSQWEDDDNEDESSSSASDIMSHKKTASADSKQLSQINFSLPKKE
GLSFLGGLRSKNDTLSRSNVCINGNHVYLEQPEAKNETKESSPSSSPSPQGFRKKHLFSS
TENLAARSWKEPGEGDSLSYDKWLSDVPTKESMKSMTLPSYRPQSSGDNRENMASANLEV
TKETKDGKKQESKKSSLFSLVTGKKDVAKGSEGESPPSIPWKEKEGKLKEAQLREEDLMR
RSEKDAAADASGQGNSLNPFEDVQISEPEARPESKSEPKLPIPSARAPQTKAVKPRLEVS
PEAQPKARLPSSPYSPLSFSALPSSSDPAPVSSELGHSSETHSSESPSVFSSSSSPIVAP
ISTSTPIEHGLPTGQGQASSEEPSLLLKAELQKESLIAVPNTMSSALGSLFKQPPVSAWK
AMEDSPRGQISETGKEKNASSSEPRKPLLEHPEAGQPKEELLKVPSPTRDRIPSSQEAHE
VPFVLSLNSGREVSPAGKPPLEGDHKVKDGGMTSATEEAVLSFDAMLQKQEERGLNVSEG
EKRVKKRVSFSEQLFTEEEVGKHTWLGEEEKNHPQEVTSEGTAEEKVPDMEPPGCPHTED
SERESVAVAQAFSASTPTEDCLLAPPSDEGSSEDPTSEGSSAKGTPLFRIEGDDALLAQY
QSKASDHEGLLSDPLSSLRSASDVKSPIMADLNLTLPSIPEVASDDERVDQVEDDRKTAK
LAAAGASSSVTLPPCPEMGKGLSGGADGSAPMESLHDCRSKAPTAAPSEQTAALGILEPH
LGMSSSVDKQLPDPGSGEEESLKGDERPSQPPVKALDSPVPSSSLSETFPAIHSLPSSPH
PNTHHTSTAESQNKATAEGSAGKVDNFGKRKPLLQAWVSPSETHPVSAQPSAGTGATKHR
LHPVKPMNTTATKIANSSLGTATIISENLINEAMMKKYNPSDPAFAYAQLTHDELIQLVL
KQKETISKKEFQVRELEDYIDNLLVRVMEETPNILRIPAQVGKKAGKM
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcggcctcggcgggccggggcccgggggccgtgtggtcccccacccatgtg
caggtgacggtgctgcaggcgcggggtttgcgggccaagggccctgggggtacgagcgac
gcgtacgcggtgatccaggtgggcaaagagaagtacgccacctcggtgtcggagcgcagc
ctcggcgcgccggtgtggagggaggaagccaccttcgagctgccgccgctgctgtcctcc
ggagctgtgccagcggccgccgccaccctgcagctcaccgtgctgcaccgcgcgctgctc
ggactcgacaagttcctgggccgcgccgaggtggacctgcgggagctgcaccgcgaccag
ggccgcaggaagacgcagtggtatatcttgaaatccaaacccggaaagaaggataaggag
cgaggagaaatcgaggtcgacatccagtttatgaggaacaacatgactgctagcatgttt
gacctctctgtgaaagacaagtctcggaatccatttggaaaattgaaggacaagatcaaa
gggaagaataaggatagtgtgtcagaaaccacttcagccatagtccccagcatgtcaccc
tcagtcgacagtgatgacgagtctttttccaaagacaagaagaagaaatcaaagatcaaa
accttgttttccaagtcgaatttgcagaaaacaccactttcccaatctatgtctgtcctg
cctacttcaaagccagacaaagtgctgcttcgtcctggagatttccagtcccagtgggag
gatgacgacaatgaggatgaatcctcctcctctgcctcagacatcatgtcccacaaaaag
acagcaagtgcagactctaagcaactgagccagatcaacttcagccttcccaagaaggaa
ggactgtcctttcttgggggccttcggtccaagaatgacacactttcccgctctaatgtc
tgtatcaatgggaaccatgtttacctggagcagccagaagccaagaatgagaccaaggag
agcagcccttcttcttccccatccccccagggcttcaggaagaagcatttgttctcatct
actgaaaacctggctgcccgatcttggaaggagcctggggaaggagacagcctgtcttat
gataagtggctatctgatgtccccaccaaggagtccatgaagtccatgactctgccatcc
taccgaccacagtctagtggtgacaatagggaaaacatggcttcagcgaatttggaggtt
acaaaagaaaccaaagacggcaagaagcaggagagcaagaagtcctctttgttttctctg
gtgacaggaaagaaggatgtggccaagggcagtgaaggtgaaagccctccttccatccca
tggaaggagaaggaaggcaaactcaaggaagcccagctgagagaggaagacctcatgaga
aggtccgagaaagatgctgcagctgacgcctctggacagggtaactccctgaaccccttt
gaagatgtgcagatctcagaaccagaagccagacctgagtccaagtctgaaccaaagcta
cctattccctctgcaagggctccccagaccaaagccgtcaagcctcgactggaagtgtct
ccagaggctcagcccaaagccaggcttccttcttccccttactctcctctctctttttct
gctcttccttccagttctgatccggcccctgtctcttctgaattggggcatagttcagag
acacactcctctgaaagtccctctgtcttctcttcctcctcatctcccatagtagctcca
atttccacatccaccccgatcgaacatgggctccccacaggccagggccaggccagttct
gaagaaccatctttgcttcttaaagcagaattgcaaaaggaaagtttaatagcagttcca
aatacaatgtcttctgccttgggatcacttttcaaacaaccacctgtctcagcatggaaa
gcaatggaagattctccaagggggcagatcagtgagacaggcaaggagaagaatgccagc
agcagtgaacccagaaagcctctcctggagcatcctgaagcggggcaaccaaaagaagaa
cttctgaaagttccctccccaacacgagaccgcatcccctcatctcaagaggcccatgaa
gtcccatttgtgctttccctcaacagtggtagagaggtaagccccgctgggaagcctccc
ttggagggagaccacaaagttaaggatggggggatgacttccgcaactgaggaagcagtg
ctctcatttgacgccatgttgcagaaacaggaagagaggggtctgaatgtcagtgagggt
gaaaagagagtcaagaagcgcgtatcattttcggagcagctcttcacagaagaggaggta
gggaaacacacttggttgggggaagaagaaaaaaatcatccccaagaggtgacttctgaa
gggactgctgaagaaaaggtgcctgatatggaacctcctgggtgtccccacacagaagac
tcggagagggaatctgtggctgtggcccaggctttcagtgcatcaacccccacagaagat
tgccttctcgctcctcctagtgatgagggttcctcagaagaccccacaagtgaaggcagc
tctgcgaaaggcaccccactcttcaggattgagggggacgatgcccttctggctcaatat
cagagcaaagccagtgatcatgaaggtttgctgtcagaccccctgagcagccttagatct
gcttcagatgtgaagtcccccatcatggctgatctgaacttgaccctcccttccattcct
gaagtggcctcggatgatgaaagagtagatcaggttgaagatgacaggaagacagcaaag
ctggctgcagcaggagcttcatcctcagtcacgttacctccctgtcctgagatgggaaag
gggctgagtggtggggcagatgggtcggctcccatggagagtctgcacgactgcaggtca
aaggcccccacagcagctccttcagagcagacggcagctttaggaattttagaaccacat
cttggcatgagctcaagtgtggataaacagctgccagaccctggcagtggtgaggaagaa
agtctaaagggagacgagaggccaagtcagcctcctgtcaaggccctggactctcctgtg
cccagctcctccctttctgagacctttcctgccatacactctctccctagctctccacat
cccaacactcaccacaccagtacagcagaatctcaaaacaaagcaacagcagagggctcc
gctggtaaagttgacaattttggcaagaggaagccgcttcttcaggcctgggtctcaccc
tcggagacacatccagtctcagctcagccaagcgctggaactggggcaaccaagcacaga
cttcaccctgtgaagccaatgaacacaacagccaccaagattgctaactccagtttggga
actgctaccatcatcagtgagaatttgatcaatgaagccatgatgaagaaatacaatcct
tcagaccctgcctttgcctatgcacagctgactcatgacgaattgatccagttggtcctc
aaacagaaggaaaccataagcaaaaaggagtttcaggttcgagagctggaagactacatt
gacaatctgcttgtcagagtcatggaagaaacccccaacatcctccgcattcctgctcag
gtcggcaaaaaagcaggaaagatgtga
DBGET
integrated database retrieval system
