KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973962
Entry
101973962         CDS       T10664                                 
Name
(RefSeq) small nuclear ribonucleoprotein E
  KO
K11097  small nuclear ribonucleoprotein E
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101973962
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:iti03019]
    101973962
   03041 Spliceosome [BR:iti03041]
    101973962
   03032 DNA replication proteins [BR:iti03032]
    101973962
Messenger RNA biogenesis [BR:iti03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     101973962
Spliceosome [BR:iti03041]
 Complex A
  U1 snRNP components
   Sm proteins
    101973962
  U2 snRNP components
    101973962
 Complex B
  U1 snRNP components
    101973962
  U4/U6.U5 tri-snRNP components
    101973962
 Complex C
  U2 snRNP components
    101973962
DNA replication proteins [BR:iti03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     101973962
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 101973962
NCBI-ProteinID: XP_005338592
UniProt: I3ND94
LinkDB
Position
Unknown
AA seq 92 aa
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN
NT seq 279 nt   +upstreamnt  +downstreamnt
atggcgtaccgtggccagggccagaaggtccagaaggtgatggtgcagcccatcaacctc
atcttcagatacttgcaaaacagatcccggattcaggtgtggctctatgagcaagtgaat
atgcggatagagggctgtattattggttttgatgaatacatgaaccttgtattagatgat
gcagaagagattcattctaaaacaaagtcaagaaaacagctgggtcggatcatgctaaaa
ggagataatattactctgctacaaagtgtctccaactag

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