Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973964
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Entry
101973964 CDS
T10664
Name
(RefSeq) LOW QUALITY PROTEIN: protein Tob1-like
KO
K14443
protein Tob/BTG
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101973964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101973964
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101973964
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101973964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
TFIIA
KAR9
Motif
Other DBs
NCBI-GeneID:
101973964
NCBI-ProteinID:
XP_013219885
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Position
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AA seq
339 aa
AA seq
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MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHV
GEKVDPVIEQASKESGLDIDDVRSNLPEDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
GCELDKEIKNSFNPEAQVFMPINDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTA
TFAATKFGSTKMKNSGRSNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLGSQQQP
QQQQQPSQPLPPPQQQQQQKTSALSPNAKEFIFPNIQGQGGSTNGMFPGDSPLNXQYSNA
FDVLEAYGDLNEKSFVGGLNFXLNNVQYSNQQFQPVMAN
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgaaatccaagtagcactgaattttattatttcatatttgtacaataagctt
cccaggagacgtgtcaacatttttggtgaagagcttgaaagacttcttaagaagaaatat
gaagggcactggtatcctgaaaagccttacaaaggatcagggtttagatgtatacatgta
ggggagaaagtggatccagtgattgaacaagcatccaaagagagtggtttggatattgac
gatgttcgtagcaatctgccagaggatcttagtgtttggatcgacccatttgaggtttcc
taccaaattggtgaaaagggaccagtgaaggtgctttatgtggatgataataatgaaaat
ggatgtgagttggataaggaaatcaaaaacagctttaacccagaggcccaggtttttatg
cccataaatgacccagcctcttcagtgtccagctctccatcgcctccctttggacactct
gctgctgtaagccctaccttcatgccccggtccactcagcctttaacctttaccactgcc
acttttgctgccaccaagttcggctctaccaaaatgaagaatagtggccggagcaacaag
gttgcgcgtacttctcctatcaacctcggcctgaatgtgaatgacctcttgaagcagaaa
gccatctcttcctcaatgcactctctgtacgggctgggcctgggtagccagcagcagcca
cagcagcagcagcaaccatcccagccgctgccgccaccacagcagcagcaacagcagaaa
acctctgctctttctcctaatgccaaggaatttatttttcctaatattcagggtcaaggt
ggcagtactaatggaatgttcccaggtgacagcccccttaacnttcagtacagtaatgcc
tttgatgtacttgaggcctatggtgacctcaacgagaagtcttttgtaggtggcttaaat
tttngcttaaataacgtacagtattctaaccagcaattccagcctgttatggctaactaa
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