Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101974412
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Entry
101974412 CDS
T10664
Symbol
Clasp1
Name
(RefSeq) CLIP-associating protein 1 isoform X16
KO
K16578
CLIP-associating protein 1/2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
iti03036
]
101974412 (Clasp1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
iti04812
]
101974412 (Clasp1)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
101974412 (Clasp1)
Cytoskeleton proteins [BR:
iti04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
101974412 (Clasp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
HEAT
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Cnd1
HEAT_2
HEAT_DAAF5
RTP1_C1
MMS19_N
ParcG
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
101974412
NCBI-ProteinID:
XP_021577537
LinkDB
All DBs
Position
Unknown
AA seq
1576 aa
AA seq
DB search
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAHTLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHGHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS
DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLESRPLREDLEYVGLDADGTTTKA
EGRIRTRRQSSGSATNVASTPSDSRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGS
GYGGLAGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRD
TSRESSRDTSPARGFPPLASRRHSRSTSALSTAESVGQSDRFGLGQPGRIPGSVNAMRVL
STSTDLEAAVADALLLGDARSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGG
IPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFA
DPHSKIADSEAECEDKEGNLLSSEGSCPRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQL
LKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIE
SLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLG
ALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHPSSRTSPLTSPTNCSHGGLS
PSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGAA
SPATEGRGGSEGEGGRTALDNKTSLLNTQPPRAFPGPRAREYNPYPYSDTINAYDKTALK
EAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEE
HFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKE
VVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERIAKESLLQLL
ADIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQ
TTNSNSSSSSDVSTHS
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcgaatggagtcctgcctggctcaggtgttgcaaaaggatgtggggaaacga
ctgcaggttggccaggaacttatagactatttctcagacaaacagaagtctgctgacctt
gagcatgatcagaccatgttagataagcttgtggatggactcgctacctcttgggtgaac
tctagtaattacaaggtggttcttctgggcatggatatcctgtcggctctggtgacccgg
ctgcaggatcggttcaaggcgcaaatcggcacagtgctgccaagtctaatagacagactg
ggagatgctaaagactctgtaagggagcaagaccaaactctgctgctaaagatcatggat
caagctgctaatccccagtatgtatgggacagaatgcttggaggcttcaaacacaagaat
ttccgtacaagagaaggcatctgtctctgccttattgcaacactcaatgcctctggagca
catactctgacactaagcaagatcgtgccacacatatgtaacttacttggagacccaaac
agtcaggttcgagatgcagcaataaacagcttagtggaaatttacagacatgtaggagaa
cgcgtgagggcagatctcagtaaaaaaggattgccacagtcccggctgaatgtcattttt
acaaaatttgatgaagtccaaaaatctggaaacatgatacaatctgcaaacgataaaaat
tttgatgatgaagattccgtggatggtaatagaccttcttctgccagttctacatcatcc
aaagctcctccaagctcacggagaaacgttggaatgggaaccacccgccggcttgggtca
tccactcttggatccaagtcttcagctgcaaaggaaggtgccggtgctgttgatgaagag
gattttattaaagcatttgatgatgtacctgtagtgcagatttattccagccgcgatctt
gaagaatccataaacaaaattagggaaatattatctgatgacaaacatgattgggagcag
agagtaaatgctctaaaaaagattagatctttacttttggctggtgctgctgagtatgat
aacttctttcaacatctgcgtcttttggacggagcctttaaactctctgctaaggatctg
cggtctcaggtagtgcgagaggcttgtatcacgttggggcatctgtcatcggttctagga
aataaatttgaccatggagctgaagccattatgccaactatatttaatttaattccaaac
agtgccaaaattatggccacttctggtgttgtagctgttagattaatcattcggcacaca
cacatccctagactaatacctgttataacaagcaactgtacctctaagtctgttgcagtt
agaaggcgctgttttgaatttttagatttgcttctacaagaatggcagacacattcactg
gaaagacacatatcagtattagctgaaacaataaagaagggaatccatgatgctgattct
gaagcaagaatagaagccaggaaatgttactggggcttccatggtcatttcagcagagaa
gcagagcacttataccatactctggagtcctcctaccagaaagccctgcagtcccatttg
aagaactcggacagcatagtgtctctgccccagtctgatcgttcatcttccagctctcag
gagagtctcaatcggccgctctctgccaaaagaagcccaactggcagcaccacatctaga
gcttctacagttagcaccaagtctgtatcaacaactggatccctccagcgatctcgaagt
gacatcgatgtgaacgcagctgccagtgccaaatctaaagtctcctcgtcttcaggcacg
acacccttcagttctgcagcggctttgcctccagggtcctatgcatctttagagtccaga
cccctgagggaagacttggagtacgtaggcctggatgcagatggtactaccactaaagcg
gagggtcgcatccgcacaagaagacaaagctccgggagtgccaccaatgttgcttctaca
ccttctgacagtcggggccgcagtcgtgctaaagtggtttcacagtctcagcgatccaga
tctgctaatcctgctggtgctggcagtcggtcgagttcccccgggaaattgttgggaagt
ggctatggtggacttgctggtggttcttcgagaggcccacctgtgacaccatcttcagaa
aaacgaagcaagattcccaggagtcaggggtgtagccgagaaacaagtccaaaccgaata
ggattagcacggagcagccgtatccctcgacccagcatgagtcaggggtgcagccgcgat
accagccgtgagagcagccgagatacaagccccgctcggggcttccctccactcgcctct
cgacgtcattccaggtccactagtgctctctccactgctgaatctgttgggcagtcagac
cgatttgggctgggccagccaggaagaataccaggttccgtgaatgccatgcgggttttg
agcaccagtacagatctggaagctgcagttgctgatgctttgctgttaggagacgccagg
agcaagaagaagcctgtgaggaggagatatgagccatatgggatgtattctgatgatgac
gccaacagcgatgcctcaagtgtttgctccgagcgctcctatggctccaggaatggcggc
attccccattatttgcggcagaccgaggatgtagcagaagttctcaaccactgtgcaagt
tcaaactggtcagaaaggaaagaagggctgctgggcttgcagaacttgctgaagagccaa
agaacactgagtcgagtagaattgaagagattgtgtgagatcttcacccgaatgtttgct
gaccctcatagcaagattgctgattcagaagcagaatgtgaggataaagaaggaaatttg
ttatcatcagaaggctcttgtccaagagttttcagtatgttcttggagactctagtggat
tttataataattcataaggatgacttgcaagactggctttttgtccttctcacacaatta
cttaagaaaatgggagcagatttacttggctctgtgcaagcaaaagttcagaaggcccta
gatgtcacaagggactcctttccatttgatcaacagtttaacattttgatgagatttatt
gtggatcaaactcagactccaaacctcaaggtcaaagttgcaatcctgaaatacattgag
tctctggccagacagatggacccaacagattttgtaaactctagcgagacgaggcttgct
gtttctagaatcattacctggacaacagaaccaaagagttcagatgtgagaaaggcagca
cagattgtgctcatctctctgtttgaattgaacactccggaatttaccatgttacttggt
gccttgcccaaaacattccaggatggtgccaccaaactgctgcataaccacctcaagaac
tctagtaacactagtgtgggatctccaagcaatacaattggccggacgccctcccgacac
cccagcagcaggaccagccctctgacctcacctaccaactgttcccatgggggtctatca
ccaagcatgctggactatgacacagagaacctgaactctgaagaaatctatagttctctg
cggggagttacagaagccattgaaaagtttagtttccgaagccaagaagatctgaatgag
ccaattaagcgtgatggcaaaaaggactgtgatatcgtgtcccgcgacggaggagctgcc
tcgccagccaccgagggccggggaggcagtgaaggggagggaggcaggacagctctagac
aacaagacctccctcctcaacacccagcctccgcgtgccttcccaggaccgcgtgcacgg
gagtacaacccgtatccctactcagacaccatcaacgcctacgacaagaccgccctgaag
gaagccgtgtttgacgatgacatggagcagctcagagatgtgcccattgaccattctgac
ctggtggctgacctgctgaaagaactgtccaaccacaacgagcgggtggaggagcggaaa
ggtgccctgctagagctgctcaagatcaccagggaagacagcctgggcgtctgggaggag
cacttcaagaccatcttgctgctgctgctggagacccttggagacaaagatcattcaatt
cgagcactggcattgcgagttttacgggaaattctgagaaaccagcctgcaagattcaaa
aactacgctgagctgacgatcatgaagactctggaagcccacaaagactcccacaaggag
gtggtgcgagctgctgaggaggctgcctccacactggccagttccatccacccagagcag
tgcatcaaagtgctctgccccatcatccagacagccgactaccccatcaacctggccgcc
atcaagatgcagaccaaagtcgtggagagaatcgccaaggagtccttgctgcagctcctc
gccgacatcatcccgggcctgctgcagggttatgacaacacggaaagcagcgtgcggaag
gccagcgtgttttgcttagtggcaatttattccgtaatcggagaagacctgaaacctcac
ctcgcacagctcacggggagcaagatgaagctactaaacttatacataaagagggcacag
accaccaacagcaacagcagctcctcctccgacgtctccacgcacagctag
DBGET
integrated database retrieval system
