KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101974415
Entry
101974415         CDS       T10664                                 
Symbol
Vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:iti00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101974415 (Vps28)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:iti04131]
    101974415 (Vps28)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:iti04147]
    101974415 (Vps28)
Membrane trafficking [BR:iti04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    101974415 (Vps28)
Exosome [BR:iti04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101974415 (Vps28)
  Exosomal proteins of other body fluids (saliva and urine)
   101974415 (Vps28)
  Exosomal proteins of colorectal cancer cells
   101974415 (Vps28)
  Exosomal proteins of bladder cancer cells
   101974415 (Vps28)
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 101974415
NCBI-ProteinID: XP_005316090
LinkDB
Position
Unknown
AA seq 221 aa
MFHGIPATPGMGAPGNKPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDC
VTPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERVKEDRPITIKD
DKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTV
SQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAFNRFLHA
NT seq 666 nt   +upstreamnt  +downstreamnt
atgtttcacgggatcccagccactcccggcatgggagcccctgggaacaagccagagctg
tatgaggaagtgaagttgtacaagaatgcccgggagagggagaagtatgacaacatggca
gagctgtttgcagtagtgaagacaatgcaggcactggaaaaagcatacatcaaggactgc
gtcacccccaacgagtacactgcagcctgctctcggctcctggtccagtacaaagctgcc
ttccggcaggttcaaggctcagaaatcagttccattgatgaattctgccgcaagttccgc
ctggactgcccactcgccatggagagggttaaggaagacaggcccatcaccatcaaggat
gacaagggcaacctcaaccgctgtattgctgatgttgtctcactcttcatcacagtaatg
gacaaactgcgcctagaaatccgcgccatggacgagatccagcctgacctgcgggagctg
atggagaccatgcaccgcatgagccacttgcccccagactttgagggccgccaaacagtc
agccaatggctacagaccctgagcggcatgtcagcatctgatgagctggatgactcccag
gtacggcagatgctcttcgatctggagtccgcctacaacgcctttaaccgcttcctgcac
gcctga

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