KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101974424
Entry
101974424         CDS       T10664                                 
Symbol
Tnnc1
Name
(RefSeq) troponin C, slow skeletal and cardiac muscles
  KO
K05865  troponin C, slow skeletal and cardiac muscles
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04020  Calcium signaling pathway
iti04260  Cardiac muscle contraction
iti04261  Adrenergic signaling in cardiomyocytes
iti04814  Motor proteins
iti04820  Cytoskeleton in muscle cells
iti05410  Hypertrophic cardiomyopathy
iti05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:iti00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    101974424 (Tnnc1)
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    101974424 (Tnnc1)
   04820 Cytoskeleton in muscle cells
    101974424 (Tnnc1)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    101974424 (Tnnc1)
   04261 Adrenergic signaling in cardiomyocytes
    101974424 (Tnnc1)
 09160 Human Diseases
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    101974424 (Tnnc1)
   05414 Dilated cardiomyopathy
    101974424 (Tnnc1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:iti04812]
    101974424 (Tnnc1)
Cytoskeleton proteins [BR:iti04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     101974424 (Tnnc1)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_8 EF-hand_6 EF-hand_5 EF-hand_9 AIF-1 EH SPARC_Ca_bdg DUF5580_M DUF6694 EF_EFCAB10_C
Other DBs
NCBI-GeneID: 101974424
NCBI-ProteinID: XP_005317234
UniProt: I3LWE3
LinkDB
Position
Unknown
AA seq 161 aa
MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM
IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKMM
LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE
NT seq 486 nt   +upstreamnt  +downstreamnt
atggatgacatctacaaggctgcggtagagcagctgacagaagagcagaaaaatgagttc
aaggctgcctttgacatctttgtgctgggtgctgaggatggctgtatcagcaccaaggaa
ctgggcaaggtgatgaggatgctgggccagaaccccacacctgaggagctgcaggagatg
attgatgaagtggatgaggatggcagcggcacagtggacttcgatgagtttttggtcatg
atggttcgatgcatgaaggacgacagcaaagggaagtctgaggaggagctttctgacctc
ttccgcatgtttgacaaaaatgctgatggctacattgacctggaggaattgaagatgatg
ctgcaggctacaggtgagactatcacggaggacgatatcgaggagctcatgaaggatggc
gacaagaacaatgatggtcgcatagactatgatgaattcttggagttcatgaagggtgtg
gagtag

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