Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101974580
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Entry
101974580 CDS
T10664
Symbol
Nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X3
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04010
MAPK signaling pathway
iti04064
NF-kappa B signaling pathway
iti04380
Osteoclast differentiation
iti04625
C-type lectin receptor signaling pathway
iti05134
Legionellosis
iti05166
Human T-cell leukemia virus 1 infection
iti05169
Epstein-Barr virus infection
iti05200
Pathways in cancer
iti05203
Viral carcinogenesis
iti05224
Breast cancer
Brite
Transcription factors [BR:
iti03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
101974580 (Nfkb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101974580
NCBI-ProteinID:
XP_005333685
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Position
Unknown
AA seq
901 aa
AA seq
DB search
MDSCYDPGLDGIAEYDDFKFSPSVVEPKEPVPETADGPYLVIVEQPKQRGFRFRYGCEGP
SHGGLPGASSEKGRKTYPTVKICNYEGPAKIEVDLVTHSDPPRAHAHSLVGKQCSELGVC
AVSVGPKDMTAQFNNLGVLHVTKKNMMEIMIQKLQRQRLRSRPHGLTEAERRELEQEAKE
LKKVMDLSIVRLRFSAFLRASDGSFSLPLKPVISQPIHDSKSPGASNLKISRMDKTAGSV
RGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIE
RPVTVFLQLKRKRGGDVSDSKQFTYYPLVEDKEEVQRKRRKALPTFSQPFGGGSHMGGGS
GGSAGGYGGAGGGGGSLGFFPSSLAYSPYQSGAAPMGCYPGGGGGAQMASSSPGVDAMEE
AAEPSAPPGNPEGEPQAPNALLRAREYNARLFGLTQRSAQALLDYGVTADARALLAGQRH
LLMAQDENGDTPLHLAIIHGQTSVIEQIAHVIYHAQHLGVVNLTNHLHQTPLHLAVITGQ
TRVVSFLLQVGADPALLDRHGDSAIHLALRAGAGAPNLLQALLHSGAPTVPQLLHMPDFE
GLYPVHLAVRARSPECLDLLVDNGAEVEAAERQGGRTALHLATEMEELGLVTHLVTKLHA
NVNARTFAGNTPLHLAAGLGSPTLTRLLLKAGADIHAENEEPLCPLPSPPTSGSDSDSEG
PERDIQSSFRGHTPLDLTRSTKVKTLLLNAAQNIMEPPLTPPSPAGPGLSLGETALQNLE
QLLDGPEAQGSWAELAERLGLRSLVDTYRKTASPSGSLLRSYKLAGGDLSGLLDALSDMG
LDEGVRLLRGPETREKLPSTAEVKEDSAYGSQSVEQEAEKLGPPPEPPGGLCHGHPQPQV
H
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggacagttgctacgacccaggtctggatggtattgctgaatatgatgatttcaaattc
agtccctccgttgtggaacccaaggagccagtccccgagacagctgatggcccctacctg
gtgattgtggaacagcctaagcaacgtggcttccgatttcgatatggctgtgaaggtcct
tctcatggaggcctgcctggtgcctcaagtgagaagggacggaaaacctatcccactgtc
aagatctgtaactacgagggccctgccaagattgaggtggacctggtaacacacagtgac
ccacctcgtgctcatgcccacagcctggtgggcaagcagtgctcagagctgggagtctgt
gctgtctctgtggggcccaaggacatgactgcccaattcaataacctgggtgtcctgcat
gtgaccaagaagaatatgatggagattatgatacaaaaacttcagaggcagaggctccgc
tccaggccccacggtcttacagaggctgagcgtcgggagctggagcaggaggccaaagag
ctgaagaaagtgatggatctgagtattgtgcgtctacgcttctctgccttccttcgagcc
agtgatggctctttttcccttcccctgaagccagttatctcccagcccatccatgacagt
aaatctccaggggcctcaaacctgaagatttctcgaatggacaagacagcgggctctgta
cggggtggagatgaagtttatctgctttgtgacaaggtgcagaaagatgacattgaggtt
cggttctatgaggatgatgagaatggatggcaggcctttggggacttctctcccacagat
gttcataaacagtatgccattgtgttccggacacctccctatcacaagatgaagattgag
cggcctgtaacggtgttcctacaactgaaacgcaagcgtggaggggatgtatctgactcc
aaacagttcacctattatcctctggtggaagacaaggaggaggtgcagcggaagcggagg
aaggcattgcctaccttctcccagccctttggaggtggctcgcacatgggtggaggctct
gggggctctgctgggggttatggaggagctggaggaggaggtggcagcctcggctttttc
ccctcctccttggcctacagcccctaccagtccggcgcagccccaatgggctgctacccg
ggcggcgggggcggggcgcagatggcctcctcctcgccgggtgtggatgctatggaggaa
gcggcagagccaagcgcgccccctggaaacccagagggcgaaccacaggctccaaacgcc
ctgctacgagctcgggagtacaacgcgcgcctgtttggcctgacgcagcgcagcgcccaa
gccttgctcgactacggcgtcacggcggacgcccgcgcgctgttggcgggacagcgccac
ctgctgatggctcaggacgagaacggagacacgccgctgcacctggcaatcatccacggg
cagaccagtgtcattgagcagatagcccatgtcatctaccatgcccagcacctcggtgtt
gtcaacctcaccaaccacctgcaccagacacccctgcacctggcagtgataactggacag
acaagggtggtgagctttctgctacaggtgggtgcagaccctgcactgctggatcgccat
ggagactcagccattcacctggcactgcgggcaggtgctggagccccaaacctgttgcaa
gcactgctgcacagtggagctcccactgtgccccagctattacatatgcctgattttgag
ggactgtatccagtacacctggcagttcgtgcccgaagccctgagtgcctggatctgctg
gtggacaatggagctgaagtggaggctgcagagcgacagggaggccgaacagcactgcat
ctagccaccgagatggaggagctggggttggttacacatctggtcaccaagctccatgcc
aatgtgaacgcccgcacctttgctggaaacacacccctacacctggcagctggactggga
tccccaactcttacccgtctccttctaaaggctggtgctgacattcacgcagaaaatgag
gagcctctgtgcccactgccctcacctcccacctctggaagcgactcagattccgaggga
cctgagagggacatccagagcagcttccggggccacacacctcttgacctcacacgcagc
accaaggtgaagaccttgctgcttaatgctgctcagaacatcatggagccccccctgacc
ccacccagccctgcaggaccagggctgtcacttggggagacagccttacagaatctggag
cagctgctagatgggccggaagcccagggtagctgggcagagctggcagagcggctagga
ctgcgcagtctagttgacacataccggaagacagcttcacccagtggcagcctcctgcgc
agttataagctggctggtggtgacttgtcaggtctgctggatgccctgtctgacatgggt
ctagatgaaggagtgcgactgctaagaggtcctgagacccgagaaaagctgcctagcaca
gcagaagtgaaggaagacagtgcatatgggagccagtcagtggaacaggaggcagagaag
ctgggcccaccccctgagccaccaggagggctctgccatgggcacccccagcctcaggtg
cactga
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