Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101974656
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Entry
101974656 CDS
T10664
Symbol
Rexo5
Name
(RefSeq) RNA exonuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101974656 (Rexo5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
iti03009
]
101974656 (Rexo5)
Ribosome biogenesis [BR:
iti03009
]
Eukaryotic type
Pre-60S particles
RNases
101974656 (Rexo5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
101974656
NCBI-ProteinID:
XP_005323971
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MEPEKEKTGRLPRKGRKRRRVPSKLIGTPEARISRSDPVDRQPEPKRARLASILIAENCE
VTHEQLCELLKYAVLGKPDIEKPRWCQLLYQSQLKRIVVVILQGMSQLHFYRFYLEFGFL
RKAFKHKFRLPPPSSNFLADIIGLQNKETAGYLPKTIEESLPSAITKPNINLQNDPIIQK
YGSKKVGLLRCILTEEEMKTFNFPLQGSPDCENFITTKCNGSVTDNSPLFGLDCEMCITS
KGRELTRISLVAEGGSCLMDELVKPDDKIIDYVTCYSGITKKMLNPVKTKLKDVQRQLKA
LLPPDAVLVGHSLDLDLRALKMIHPYVIDTSLLYAREQGRRFKLKFLAKAILGKDIQCLE
RNGHDATEDATATLELAQYFLKYGPKKIAELNLEELWRDQEIRNIREKFQYTYKSVLKCL
DSVDQKLLFLSQETDNIELPSKNCETIKCLSNKEVFEQARRQVDFHPFSIVQFSFEPFSP
LLTEEMNKRMRIKWTEMSTIYAGPFSKDCNLRALKRLFKSFGPVRTMTLVLETHQPHLYI
RYEVLEAAQLAIESLNGVLVEGIHIKVQRPVTELTLDCDTLVNELEQDSENRDTIYLSGV
SQNFLGHLQELPNLFFGLEAVIVPTDPKSGRRKKYCFLKFKTFGNAQRALHILTGKDWKL
KGRHALTPRHLHAWLRGLPPESRRPPGLRVRPPPSEQETLQNLKADHPKIAAWRWSRKIG
RLYQSLSPGTLCVILLPGTTSPHGSLSGLGLMGIKDDEEEESITPSMGL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggagccagagaaggagaagaccgggaggctccccaggaagggcaggaagaggagacgg
gtccccagcaagctgatcgggacccccgaggcgaggatatcccgttccgatcccgtggac
aggcagcccgagcccaagagagcccgattggctagcattttaattgctgaaaactgtgaa
gtaacccatgaacagttatgtgagttgctgaagtatgcagttctgggtaaacccgatatt
gagaaacccaggtggtgtcagcttctttaccaaagccaactgaagagaatagtggttgtc
atccttcaagggatgagtcaactacacttctacaggttctatttggagtttggatttctc
cgaaaagctttcaaacacaaattccgcttgcctcctccatcatctaattttctagcagat
attattgggctacaaaataaggaaacagctggatatctgcctaagaccatcgaagaatct
ttaccgtctgccattacaaaacctaacatcaacctgcagaatgaccctatcattcaaaag
tatggctctaaaaaagtgggcttgctccgatgcattctgacagaggaggaaatgaaaact
tttaactttccattacaaggttctcctgattgtgaaaactttataactaccaaatgtaat
ggatctgtaacagataacagccctctctttgggcttgattgtgaaatgtgcatcacatcc
aaggggagagaactaacacgcatttcactggttgctgaaggaggatcatgtcttatggat
gagttggtcaaacctgatgacaagattatagactacgtcacctgctattcaggaatcaca
aagaagatgcttaacccagtgaagacaaaattgaaagacgttcagaggcagttaaaagca
ctgcttcctcctgatgcggtgttagttggtcattccttagaccttgatcttcgagcattg
aaaatgattcatccatatgttattgatacctcattgctttatgccagagagcagggcaga
agattcaagctaaagttcttagccaaagctattttggggaaggatattcagtgcttggaa
agaaatggtcatgatgccacagaggatgctacagcgacccttgaattagctcaatatttt
ctcaagtatggcccaaagaagattgcagaactcaatctggaggagctatggagagaccaa
gaaataagaaatataagagaaaagtttcagtacacatacaaaagtgttttgaaatgttta
gattcagttgatcagaagctcctttttttatcccaagagacagataatattgaactccct
tctaaaaattgtgaaactattaagtgcctctcaaataaagaggtctttgagcaggccaga
aggcaagtcgacttccacccattcagtattgttcagttctcttttgagcctttttcacct
ctcctcactgaggaaatgaacaaaaggatgcggatcaagtggacagagatgtcaactatc
tatgctgggccatttagcaaagattgtaacctaagggctctgaagaggttatttaagagc
tttggcccagttcgtacaatgactcttgttcttgaaacgcatcagcctcatctctatata
cggtatgaagtcctggaagctgcccagctggccatagagtccttgaatggcgttctggta
gaaggtatacacataaaggtacagagacctgtgacagaactcactctggattgtgacaca
cttgttaatgagctggaacaagattctgagaaccgagatactatttatctgtctggagtt
agtcaaaatttcttaggacatctacaggaattgccaaatctcttttttggcctggaagct
gtgattgtgcctacagatcctaaaagcggaagacggaaaaaatattgtttcctgaaattc
aaaacttttggcaatgcccagagggccctccatatcctaacaggcaaggactggaagctg
aaaggcaggcatgccctaacccccaggcacctccatgcatggcttaggggcttaccacct
gaatcaagaaggcccccaggtcttagagttagacctcctccctcagagcaggagaccttg
cagaatttaaaggcggaccacccaaagatagcagcctggcgttggagccggaagattgga
aggctctaccaaagcctgagcccaggtaccctttgtgtcatcctcctgccaggaaccact
agccctcatggatctctatctggcctcggactcatgggaataaaagatgatgaagaggag
gaaagcatcaccccaagcatgggtttgtga
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