Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101974725
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Entry
101974725 CDS
T10664
Symbol
Fbh1
Name
(RefSeq) F-box DNA helicase 1 isoform X2
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101974725 (Fbh1)
Enzymes [BR:
iti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101974725 (Fbh1)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101974725 (Fbh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
F-box-like
F-box
UvrD_C_2
AAA_19
Viral_helicase1
AAA_30
zf_Tbcl_Rhp7
F-box_4
ResIII
AAA_12
Motif
Other DBs
NCBI-GeneID:
101974725
NCBI-ProteinID:
XP_005320362
UniProt:
I3M842
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MRRFKRKHLTAIDCQHLAQSHLTVTQPFSQRWTNRDPNHGLYPRPRTKRGSRGQGCQRYN
PEFFLADQQRRTNDMAKSSSVGQDNCQDLEGDMLFAAESSGTLLQEGDGEERLGSSGSAL
PPRKRSWSFEEESNNATGTSHRDGVAKKTPRHLSSLCTRPREARQETEDCLSQRFAELGE
TGQDIEDIGPDPIPDSYYGLLGTLPCQEVPSHICSLPSEVLRHIFAFLPVEDLYCNLSLV
CHLWKEIICDPLFIPWKKLYHRYLMNEEQAVGKVDGILLNCGIEKESDLCVLNLIRYTAT
TKCSPSVDPERVLWSLRDHPLLPEAEACVRQYLPDLFMAAGGVNVWALVAAMVLLSSSVN
DIQQLLFCLRRPSSTVTMPDVTETLYCIAVLLYAMREKGINISNRIHYNIFYCLYLQENS
CATKVQEEPSVWPGKKTIQLTHEQQLILNHKMEPLQVVKIMAFAGTGKTSTLVKYAEKWS
ESRFLYVTFNKSIAKQAELVFPSNVICKTFHSMAYGHVGRKYQLKKKLNLFKLTPFMVNS
VLAEGKGGFIRAKLVCKTLENFFASADEELTIDHVPIWCKNSQGQRVMVEQSEKLNGVLE
ASRLWDNMRKLGECKEEAYQMTHDGYLKLWQLSKPLLASFDAIFVDEAQDCTPAIMNIVL
SQPCGKIFVGDPHQQIYTFRGAVNALFTVPHTHVFYLTQSFRFGVEIAYVGATILDVCKR
VRKKTLVGGNHQSGIRGDAKGQVALLSRTNANVFDEAVRVTEGEVPSRIHLIGGIKSFGL
DRIIDIWILLQPEEERKKQNLVIKDRFIRRWVHKEGFSGFKRYVTAAEDKELEAKIAVVE
KYSTRIPELVERIGKCHIEDWDFAEYILGTVHKAKGLEFDTVHVLDDFVKVPCARHNLAQ
LPHFRVESFSEDEWNLLYVAVTRAKKRLIMTKSLENILTLAGEYFLQAELTSNVLKTGVV
RCCVGQCNNAIPVDTVLTMKKLPITYSNRKENKGGYLCHSCAEQRIGPLAFLTASPEQVR
SMERTVENIVLPRHEALLFLVF
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgagacggtttaagcggaagcatcttacagccatcgactgccaacatttggctcagagt
catttgactgtgacccagcccttcagtcagagatggacaaacagagatccgaatcatggt
ctctatcctagacccagaacaaaaagagggagtaggggtcaaggatgtcagagatacaac
cctgagttcttcctagctgatcagcagcggcgcaccaatgacatggccaaaagcagttct
gttggccaggacaactgtcaggacttggagggtgacatgctctttgctgcagagagcagt
ggtaccctgcttcaggaaggtgatggagaagagagattgggttcgtcggggtctgctctg
ccccccagaaagcgctcttggtcctttgaggaagagagtaataatgccacagggaccagc
cacagggatggagttgctaagaaaaccccacgacatttgtcgtcattatgcacaaggcct
agggaggccaggcaagagacagaggactgtttgtcacagcgctttgcagagttgggagaa
actggccaagacattgaggacattggtcctgaccccattcctgactcatattatgggctg
cttgggactttgccctgccaagaagtgccaagccacatctgtagtctgcctagtgaagtc
ctgaggcacatctttgccttcctccctgtggaagacctctattgtaatctgagcttggtg
tgccacctttggaaggagataatctgtgacccactgttcattccttggaaaaagctatat
catcgatacctgatgaatgaagagcaagctgttggcaaggtggatggcatcttgctgaac
tgtggcatagagaaggagtcagacctgtgtgtgctgaacctcatacgatacacagccacc
actaagtgctccccaagcgtagaccctgagagggtgctgtggagtctgagggaccatccc
cttcttcctgaggcagaggcgtgcgtgcgtcagtacctgcctgatctcttcatggctgct
gggggtgttaatgtctgggctttggtggcagccatggtgctcctctccagcagtgtgaat
gacatccagcagctgctcttttgcctcaggagacctagctctacagtgaccatgccagat
gtcaccgagaccttatactgcatagctgtactcctctacgccatgagggagaaggggatt
aacatcagcaataggattcattacaacattttctattgcctgtatcttcaggagaattcc
tgtgccactaaagttcaagaggaaccatctgtgtggccaggaaagaagaccatccagctt
acacatgaacaacaactgattctgaatcataagatggagcctctacaggtggtaaaaatt
atggcatttgcaggcactgggaagacctctaccctggtcaagtacgctgagaagtggtct
gagagcaggtttctgtatgtaacgttcaacaagagcatcgcaaagcaggctgagctcgtt
tttcccagcaatgtcatctgtaaaacctttcattccatggcctatggacacgttgggcgg
aagtaccagctgaagaagaagttgaatctctttaagttaacaccttttatggttaattcc
gtccttgctgaagggaaaggtggattcataagggccaagctagtgtgtaagactttagaa
aacttctttgcttcggctgatgaagagctgacgattgatcatgtgcctatttggtgtaag
aacagccaaggacagagagtcatggttgaacagagtgagaagctgaatggtgtccttgaa
gcaagccgactctgggacaacatgcggaagctaggagaatgcaaagaagaagcttaccaa
atgactcatgatggctatttgaaactctggcagctgagcaagcctttgcttgcctctttt
gacgccatctttgtggatgaggcccaggactgtaccccagctatcatgaatatagttcta
tctcagccgtgtgggaagatctttgtaggggacccacaccaacagatctataccttccgc
ggcgcagtcaatgctctgttcacagttccccacacacacgtcttctatctcacacagagt
tttagatttggtgtggaaatagcttatgtgggagctactatcttggatgtctgcaagaga
gtgaggaaaaagactttggttggaggaaaccatcagagtggcattaggggtgatgcaaag
ggacaagtggctctgttgtctcggaccaatgccaatgtgtttgatgaagctgtacgggtg
actgaaggagaagtaccttcaaggatacatttgattggggggattaaatcatttggattg
gacagaatcattgatatttggatccttcttcagccagaggaagaacggaagaaacaaaac
ctcgtcattaaagatagattcatccgaaggtgggtacacaaagaaggcttcagtggcttc
aagaggtacgtgactgctgctgaggacaaggagcttgaagcaaagatcgcagtggttgaa
aagtatagcaccaggatcccagaactggtggaaaggataggaaagtgccatatagaagac
tgggactttgcagagtacattttaggcactgtgcacaaagccaaaggcttggagtttgat
accgttcacgttttggatgattttgtgaaagtgccttgtgccaggcataatcttgcccag
cttcctcacttcagagttgagtcattttctgaggatgaatggaatttactatatgttgca
gtaactcgtgccaagaaacgtctcataatgaccaaatcactggaaaacattttgactttg
gctggggaatacttcttgcaagcagagctgacaagtaatgttttaaaaactggagtggtt
cgctgctgtgtgggtcagtgcaacaatgccatccctgtggacaccgtcctcaccatgaag
aagctgcctatcacttatagcaacaggaaggaaaacaagggtggctacctttgccactcc
tgtgcagagcagcggattgggcctttggcattcttgactgcctctccagagcaggtgcgc
tccatggaacgcactgtggaaaacatagtgctgccaaggcacgaagccctgctcttcctt
gtcttctga
DBGET
integrated database retrieval system
