Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101974806
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Entry
101974806 CDS
T10664
Symbol
Dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X4
KO
K24155
rabconnectin-3a
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101974806 (Dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101974806 (Dmxl1)
Membrane trafficking [BR:
iti04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101974806 (Dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
101974806 (Dmxl1)
RAVE complex
101974806 (Dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_WDR19_2nd
Beta-prop_HPS5
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
101974806
NCBI-ProteinID:
XP_005338593
UniProt:
A0A287DCF6
LinkDB
All DBs
Position
Unknown
AA seq
3045 aa
AA seq
DB search
MNLHQVLTGAVNPGDHCFSVGSVGDQRFTAYASGCDIVILGSDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNIISIFEPVNLPKQKKNLEYYSQWQKSGQFFLESIAHNLTWDP
TGSRLLTGSNCLQLWSNTNLHKAAEGENPDKTDLNFGDWRCIWHCKTASQVHLMKFSPDG
EFFATAGKDDCLLKVWYNVENWRTAVNSPDGSSEKQSQGEIDFSFVYLAHPRAINGFSWR
KTSKYMPRASVCNVLLTCCKDNVCRLWVETFLPNDCLLYGGDCNHWSEPINLTNNFKRNT
SSKERVQNALEVNLRHFRRGRRRSLALVAHTGYLPHQQDPHHVHRNTPLHANALCHFHIA
ASINPATDIPLLPSITSLSLSENEEKSGPFVVHWLNNKELQFTLSMEVFLQQLRKSFEHP
SSEASVEEGNQADIKSDEEMDDGIDDLKITHDKKELGGDKIVSNSNFTPLPSAAIDHQIE
VLLSEWNKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDAN
SLCKSIVMYACTKNVDLAIQQGKQKPSGLTRSTSMLISSGHNKSSNSLKLSIFTPNVMMI
SKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNA
LRTPDVDNQKQPHDSVNFEEYSLTQQNKSTGDMAFQDPNAVYSELILWRVDPVGPLSFSG
GVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVIDAK
KLLYELSNPEISKYVGEVFNIVSQQSTARPGCIIALDPITKLHGKKTQLLHVFQEDFILN
NLERKSLRKDNILADTGSSPNRFSEKFYLVVIEYTQDSRSLLHMWNLHLQSIPVSLDEKM
DTKISEAVWQPEEHYSSSPEKILSPFSQKYQACRANLQSTSKLSLFSEMVYSKEFHLPEG
VEIISVKPSAGHLSSSSIYPVCSAPYLLATSCSDEKVRFWRCRVTDGESATSKNGKMDLV
YIWEEWPLLIEDGLQSNSSISVPGRPIEVSCAHTNRLAVAYKQPASNRSSQDFLMHVSIF
ECESTGGSYWVLEQTIHLDELSTVLDSGISVDSNLVAYNKQEACLFSKESITSNTKHLVH
LDWMSREDGSHILTVGIGSKLFMYGPLSGKVQEQPGKENLTFPLWESTKIVPLSKFVLLR
SVDLVSSVDGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSSKQEPVITDSCNGSTPS
ILSLIKQSNSSSSGLHPPKKALTRSMTSLAQKICGKKTVFDPSVDMEDSGLFEAAHVLSP
TLPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVALNETESNHERRLRSLTISASG
STTRDPQAFNKAENIDYTEIDSVPPLPLYALLAADDDSCYSSLEKSNNESFLNKSSQLSK
ESYDELFQTSAIMPDINVLETDEETTKPRVIDLSQYSPTYFGPEHAQVLSGHLLHSSLPG
LSRMEQMSLMALADTIATTSTDIGESRDKSQGGETLDECGLKFLLAVRLHTFLITSLPAC
RAQLLHQGLSTSHFAWAFHSVAEEELLNMLPAMQKDDPTWSELRAMGVGWWVRNTRILRK
CIEKVAKAAFYRKNDPLDAAVFYLAMKKKAVIWGLYRSQKDTRMTQFFGHNFEEERWRKA
ALKNAFSLLGKQRFEHSAAFFLLAGCLRDAIEVCLEKLNDIQLALVIARLYESEFDISAT
YKSILRKKVLGIDSPVNEFSSLHINMHYDPFLRSMAYWILEDYSGALETLIKQPTRENDD
QVMMSACNPAVFNFYNYLRTHPLLLRRHFGSSDTFSTHMGLIGKSELAGTINLSERRLFF
TTASAHLNAGCPMLALEVLSKMPKVIKKTKPLCRASSFLDTSKDSSPLKLNTKEDKSSAV
DWSQSLMNGFESSSEGSSEKQSNSTLSFDWSQPSVMFQDDSLELKWDSENDEENEDLPIS
LKELKPLQRKIDKKLDELSNYTESFSTLDENDVLNPSEDIIAVQLKFRACLKILTVELRT
LSTGYEIDGGKLRYQLYHWLEKEVIALQRTCDFCSDAKELQSTFDNNGDEFGLNEDSDDL
HHQIKVKQLRENFQEKRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQESQQ
ETSEPLFPSPLSEQTSVPLLFACTASAKTVVANPLLHLSNLTHDILHAIINFDSPPHPDS
QSNKVYVMHTLAASLSACIYQCLCCSHNYSSFQTNQFTGMVYQTVLLPHRHSLRTGSLDE
AITPNTSPSQWPGITCLIRLLNSSGEEAQSGLTILLCEILTAVYLSLFIHGLATHSSNEL
FRIVAHPLNGKMWSAVFGGGAHVPSKEQVHSKALRVSSLVEEGEKQNKRFRPSKISCRES
APLTSSSPPVSQESLTVKEKFIPPELSIWDYFIAKPFLPPSQSKAEYDSEESLESDGDDD
DDNDDVLASDFHLQEHSNSNSYSWSLMRLAMVQLVLNNLKTFYPFAGHDLAELPVSSPLC
HAVLKTLQCWEQVLLRRLEIHGGPPQNYISSHTSEESLSAGPAILRHKALLEPTNTPFKS
KHHLALSVKRLWQYLVKQEEIQETFIRNIFTKKRCLNESLEDNNETIKNSMMEEPNFNKI
EADLGYPGGKARIIHKESDIITAFAVNKANRNCIAIASSHDVQELDVSGILATQIYTWVD
DDVELETKGSEDFLVIHAHDDLTAVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVMIKK
AINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQITCFRSGGNSRVTRMRFNYQGNKF
GIVDADGYLSLYQTNWKCCPVTGSMPKPYLTWQCHNKTANDFVFVSSSSLIATAGLSTDN
RNICLWDTLVAPANSLVHAFTCHDSGATVLAYAPKHQLLISGGRKGFTCAFDLHQRQQRQ
LFQSHDSPVKAIAIDPTEEYFVTGSAEGNIKIWSLSTFSLLHTFINEHARQSIFRNIGTG
VMQIETGPANHIFSCGADGTMKMRILPDQFSPLNEVLKNDVKFML
NT seq
9138 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgttgaccggagctgtgaaccctggcgaccactgcttctccgtg
ggcagtgtcggcgatcagcgcttcacggcttatgcatctggatgtgacattgtaatactg
ggaagcgattttgaaagattacagataataccaggagctaaacatggaaatattcaagtg
ggttgtgtagactgttcaatgcaacaaggcaagattgcagcatcctatggaaacattatc
tccatttttgaaccagttaatctaccgaaacaaaagaaaaatttggaatattatagtcag
tggcagaagagtggccaattttttctggaatcaatagcacacaatttaacttgggatccc
acaggtagtcgtcttttgactggttcgaactgtttgcaactctggtccaatactaacttg
cacaaggcagctgaaggtgaaaatcctgataaaacagatcttaactttggggattggaga
tgcatttggcattgcaaaactgcttcccaagttcatttaatgaaattttcaccagatgga
gaattttttgccactgctgggaaggatgactgccttttaaaggtatggtataatgtagaa
aactggcggacagctgttaactctccagatggaagttcagaaaaacaatcccaaggagaa
attgacttttcttttgtatatctggcccatcctcgagctataaatggattttcctggcgt
aaaacaagcaaatatatgcctagggcatctgtatgtaatgtactgttgacttgctgcaaa
gataatgtgtgtcgtctttgggtagagacatttttaccaaatgattgtttgctatatgga
ggtgactgcaatcattggtcggaaccaattaatttaacaaataacttcaagagaaatact
tccagtaaagaacgagttcaaaatgctttagaagtaaatctaagacattttcgtagaggt
cggaggagatcacttgcacttgtagcacatactggctatctgcctcatcagcaagatcct
catcatgtccacaggaacactccactgcatgccaatgcactttgccactttcatattgca
gctagcatcaacccagctacagacattcctcttcttccgtctattacatctctgagttta
agtgaaaatgaagagaagagtggaccttttgtggtacactggttaaacaataaagagctg
cagtttactttgtccatggaagtctttttacagcaacttagaaaaagttttgaacatcca
tcttctgaggccagtgtagaagaaggtaatcaagcagatataaaatctgatgaagagatg
gatgatggtattgatgatctgaaaataactcatgacaagaaggaattgggtggtgataaa
atagtatcaaactcaaattttacaccattaccatcagctgccattgatcatcagattgaa
gtacttctgtctgaatggaataaaaatgcagacatgcttttcagtattcatcccatggat
ggttctttactagtttggcatgtagattggctggatgaataccagcctggtatgtttcgt
caagtacaggtgtcctttgtttccagaattcctgtagctttccccacaggtgatgcgaac
tctctctgtaaaagcatagtaatgtatgcctgtaccaagaatgtggacttggctattcag
caggggaaacaaaaaccttctggcctcactcgttctacatcaatgcttatctcttctggt
cacaacaaatcatctaatagtttaaaattaagtatttttacccctaatgttatgatgatt
tcaaagcatgctgatggttctctgaatcagtggctggtcagttttgctgaggaatctgct
ttttctacagttcttagtatttctcacaaatccagatattgtggtcatcgttttcatctt
aatgatttagcttgccactcagtattaccattattactgacaacgtcacaccataatgca
ttaaggacaccagatgttgataaccaaaagcaacctcatgattctgtaaattttgaagaa
tattctttgacacaacaaaataaaagcactggtgatatggcatttcaggatcccaatgct
gtatatagtgagcttattctttggagggttgatccggttgggccattgtctttttctgga
ggagtgtctgagcttgcccggattaattctcttcatgtttctgccttttccaatgtggca
tggcttcctactcttatacccagttattgtctaggtgcatactgcaactctcctagtgca
tgctttgtagctagtgatggacaatatctgaggttatatgaagcagtaattgatgccaag
aaactattatatgagctttccaaccctgaaatttctaaatatgttggtgaagtgtttaac
atcgtcagtcaacaatcaacagcaaggccaggatgcattattgcgttagatcccattacc
aaacttcatggcaaaaaaacccaactgcttcatgtttttcaagaagattttattttgaat
aatcttgagaggaaaagtctcagaaaagacaacattttagctgatacaggcagttcacct
aatagattttctgaaaagttctacctagttgtgatagaatacacacaagacagccgttca
ctactacatatgtggaatttacacttacagtcaattcctgtctcattggatgaaaaaatg
gacacgaaaatatctgaagcagtttggcaaccagaagaacattattcttcttctcccgag
aagatcctatctcctttttcacagaagtatcaggcttgcagagcaaatcttcagagtacc
agcaagttgtctttgttttccgaaatggtgtatagcaaagagttccatttaccggaagga
gtagagataataagtgttaagccatcagcaggacatctgagttcttcttccatatatcct
gtatgcagtgctccttatttattggcaacttcatgctcagatgagaaagtaagattttgg
agatgcagagtaacagatggagaatctgccacatcaaagaatggaaaaatggatcttgta
tatatttgggaagaatggccattacttattgaagatggacttcagagcaatagtagtata
agtgtacctggtaggcctatagaagttagctgtgcacatacaaatcgtttagctgtagca
tataagcagcctgcatctaatagatcttctcaggactttttgatgcatgtaagtattttt
gaatgtgagtctacaggaggttcatattgggtccttgaacagacaattcatttagatgag
ttaagcacagtgttggattctggcattagtgttgatagcaatttagtggcctataataag
caagaggcatgtttattcagtaaagaaagtatcacatcaaacaccaagcatttagttcat
ttagattggatgtctagagaagatggttctcatatcctgactgtaggaattggatcaaaa
ctttttatgtatggaccactgtctggcaaagtacaagaacaacctggtaaggaaaacctg
acatttcctctctgggagagtactaaaattgtgcctctttctaaatttgtactgttacga
agcgtggacttggtttcttctgtagatggctccccaccatttcctgtttctctatcatgg
gttcgggatggcattcttgtagtaggaatggattgtgaaatgcatgtatattcccagtgg
cagccatcttctaaacaagaacctgttataacagattcatgcaatgggagcactccgtct
atactaagtttaataaaacagagtaactcatcaagttctgggttacatcctccaaagaaa
gcgctgactcgatctatgaccagtcttgcacagaaaatttgtggaaagaaaactgtattt
gatccttcagtggatatggaagattcaggtctttttgaagcagctcatgtattgtcccca
actttacctcagtaccatcccttgcaacttttggaactcatggatcttggcaaagttcga
agagcaaaggccatcttgtcacatcttgtcaagtgcattgctggggaagttgtggctctg
aatgaaactgaatccaatcatgaacgccgcctaaggtctctcaccattagtgctagtgga
agcactaccagagatccccaggcattcaacaaagctgaaaatatagattacactgaaata
gattctgtccctccacttccgttatatgccttacttgcagctgatgatgatagctgttat
tcatctttggagaaatctaataatgagagttttttaaataaatcaagccagttgtcaaaa
gaaagttatgatgaactttttcagacttcagctataatgcctgatattaatgtgttagag
acagatgaagaaactacaaagcccagagttattgatctttcacagtatagtccaacttat
tttggtcctgagcatgctcaagttctttctggccacttacttcattctagtttaccagga
cttagccggatggaacagatgtctctgatggccttagcagatactattgcaactacaagc
actgatattggagaaagcagagacaaaagccaaggtggagaaactcttgatgaatgtgga
ttaaaatttcttttggctgttagactccatacatttcttataacttcccttccagcctgt
agagctcaactccttcaccaaggcctgtctactagtcattttgcttgggcatttcactca
gtagcagaagaagaactgttaaacatgttgccagcaatgcagaaagatgatcccacttgg
tctgaactaagagcaatgggtgtgggatggtgggtccggaatacccgcatcttacgcaaa
tgcatagaaaaagtagccaaagcagccttttatagaaaaaatgatcctttagatgctgcc
gttttttaccttgcaatgaaaaagaaagctgtgatttggggcttatatagatctcaaaaa
gataccaggatgacacagttttttggacacaatttcgaagaggagaggtggcgtaaagca
gctttaaagaatgccttttctttgctaggcaaacaaagatttgaacattctgcagcattt
tttcttttagctggttgcctcagagatgcaattgaggtatgtcttgaaaaactgaatgat
attcagttggctcttgtaatagcaagactctatgaatctgaatttgatatatctgcaaca
tataaatctattttacgtaaaaaggttttgggaattgattctcccgtcaatgaattcagt
tctttgcatataaatatgcattatgatccttttctacggagtatggcatattggattttg
gaagattatagtggtgctttggaaacattaataaagcaacctaccagagagaatgatgat
caagtaatgatgtcagcctgtaatcctgcagtttttaatttctacaattatctgagaaca
catcctcttttgctgagacgtcattttggatcatctgatacattttccacacacatgggt
ttaataggaaaaagtgaactggcaggaacaattaatttaagtgaaagaagattatttttc
accactgctagtgctcatctaaatgctggctgtcctatgttggctttggaagtattatca
aagatgcctaaagtcatcaagaaaacaaaacctctttgtagagcatctagttttctcgat
actagtaaagattcttctccattaaaattgaatacaaaggaagataagtcttcagctgtt
gattggtcacaatcactgatgaatggttttgaatcttcttctgagggttcctcagagaaa
caatcaaactccactctctcttttgattggagccaaccaagtgtcatgtttcaagatgac
tctttagagttaaaatgggatagtgaaaatgatgaagaaaatgaggatcttcctatttca
ttgaaagaactaaaacctctacagagaaaaatagataaaaaattagatgaactaagtaat
tacacagaatctttcagcacactagatgaaaatgatgtgttaaatccatcagaagatata
attgctgttcaattaaaatttagagcatgtttaaaaattctcacagtagaacttcgtact
ttatctactggctatgaaatagatggtggaaaattgcgttaccagctataccactggctt
gaaaaagaggtgatagctcttcagaggacttgtgacttttgctctgatgcaaaagaacta
cagagtacatttgacaacaatggagatgaattcggattaaatgaggattctgatgatttg
catcatcaaataaaagtgaaacaactgagagaaaattttcaggaaaaaagacagtggctt
ttgaaataccagtcactgttgagaatgtttcttagttactgcatacttcatggctcccac
ggtgggggtcttgcatctgtgagaatggaactgattttgcttttgcaagaatcccaacag
gaaacatcagaaccactatttcctagccctctgtcagagcaaacctcagtgcctctcctc
tttgcttgtacagccagtgccaaaacagtagttgccaatccattattgcaccttagtaat
ctgacacatgatattctacatgccataataaactttgattcaccacctcatcctgacagc
caaagcaataaagtatatgtaatgcacaccttagcagcctcactttctgcttgtatttat
cagtgcctttgttgtagtcataactacagttcatttcaaacaaaccagtttactggaatg
gtgtatcagacagtactgcttcctcatcgacattccttgagaacaggaagcttagatgaa
gcaataactcccaatacatcaccatctcagtggccaggaataacttgtctaattagactt
ttgaattcttctggtgaggaagcccagtcgggacttacaatcttgctctgtgagattctc
acagcagtatatcttagcctcttcattcatggcctggcaacacattctagtaatgaacta
tttcggattgtggcccatcccctaaatggaaaaatgtggtctgctgtatttggtggaggt
gcacatgttcccagcaaagaacaggtgcactctaaagctttacgcgtttcttcactagtt
gaagaaggagaaaaacagaacaaacgttttaggccatcaaaaatatcttgcagagaatct
gccccactgacctcctcctcaccaccggtaagccaggagtcattgacagtcaaagagaag
ttcatcccacctgaactcagtatctgggactatttcattgccaagcctttcctaccacct
tcccaaagtaaagctgaatatgattcagaggagagtctggaaagtgatggtgatgatgat
gatgataatgatgatgttttagcttcagattttcatctccaagagcattctaattcaaat
tcatatagttggtcattgatgcgattggcaatggtgcaattggttctcaacaatttgaag
acattctatccctttgcgggtcatgatcttgcagaacttccagtcagttcacctctttgt
catgcggttctgaaaactcttcaatgttgggaacaagttcttcttcgaagacttgaaatc
catggtggaccacctcaaaattatatctcaagtcatacctctgaagagagtttgtctgca
ggtcctgctattctgcgccacaaagctttactggaacctacaaacactcctttcaaatcc
aaacatcatctggcattatctgtgaagaggctttggcaatacttggtgaagcaagaagaa
attcaagaaacgtttatcagaaatatattcacaaagaaacgatgtctaaatgagtcatta
gaggacaacaatgaaaccatcaaaaattctatgatggaggagccaaacttcaataagata
gaagcagatttgggatatcctggaggtaaagcaagaattattcataaggaatctgatatc
attactgcatttgctgttaataaagcaaatagaaattgcatagcaattgcttccagccat
gatgttcaagaactggatgtttctggaattctggctacacagatctatacttgggtagat
gatgatgtagaattggaaaccaaaggatcagaagatttcttggttatacatgctcatgat
gatttaacagctgttcaaggcacaacgccatatacacatagtaatcctggcactccaatc
aacatgccgtggcttggtagtacacagactggcagaggagcatctgtgatgattaagaaa
gccattaataatgtcagaagaatgacttcacatccaactcttccttactatctgacaggc
gctcaagatgggagtgtcagaatgtttgaatggggccattctcaacaaataacctgtttt
cgatctggcggcaattcaagagttacaagaatgagatttaactatcagggaaataagttt
ggaatagttgatgctgatggatatttaagtttgtatcaaacaaactggaaatgttgtcca
gttactgggagcatgcctaagccatacctgacttggcagtgtcataacaaaacagccaat
gattttgtcttcgttagttcctcttctctgatagccacagctggtctttcaactgataat
cgaaacatatgtttgtgggatactctcgtagcacctgccaatagtttagtccacgctttt
acctgccatgatagtggagccacagttttagcatatgctcctaaacatcaactactaata
tcaggtggcagaaaaggtttcacatgtgcatttgaccttcaccaacgacaacaaaggcaa
ctttttcagagccatgattcccctgttaaagccattgctattgatccaactgaagagtac
ttcgttacaggatctgcagaaggcaatataaagatttggagtctttctactttcagtctt
ctccacacttttatcaatgaacatgctcggcagtccatttttagaaatattggaaccgga
gtgatgcaaattgagacaggaccagcaaatcacattttctcttgtggagctgatggaaca
atgaaaatgaggatattgccagatcaatttagccctttaaatgaagtgttaaaaaatgat
gtgaaatttatgctgtaa
DBGET
integrated database retrieval system
