Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101974839
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Entry
101974839 CDS
T10664
Symbol
Arntl
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X15
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04710
Circadian rhythm
iti04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
101974839 (Arntl)
09159 Environmental adaptation
04710 Circadian rhythm
101974839 (Arntl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101974839 (Arntl)
Transcription factors [BR:
iti03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101974839 (Arntl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
101974839
NCBI-ProteinID:
XP_005326843
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MINIESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCN
AMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVG
CDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAK
TGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIH
STGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQTVNGEIRVKSMEYVSR
HAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTRDKITTNC
YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTTSPHSM
DSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLN
ITSTPPPDASSPGGKKILNGGTPDIPSSGLLPGQAQENPSYPYSDSSSILGENPHIGIDM
IDNDQGSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgattaatatagaaagcatggacacagacaaagatgaccctcatggaaggttagaatat
acagaacatcagggaaggatcaagaatgcaagggaagctcacagtcagattgaaaagagg
cgtcgggataaaatgaacagttttattgatgaattggcttctttggtaccgacatgtaat
gcgatgtccaggaaattagataaactgaccgtgctaaggatggccgttcagcacatgaaa
acattaagaggtgccaccaatccatatacagaagcaaactataaaccaacttttctatca
gatgatgaattgaaacacctcattctcagggcagcagatggatttttgtttgtcgtagga
tgtgaccgagggaagatactctttgtctcagagtctgtcttcaagatcctcaactatagc
cagaacgatctgattggtcagagtttgtttgactacctgcaccctaaagatatcgccaaa
gtcaaggagcagctctcctcctctgacacagcaccccgggagcggctcatagatgcaaaa
actggacttccagttaaaacagatataacccctgggccgtctcgattatgttctggagca
cgacgttctttcttctgtaggatgaagtgtaacaggccttcagtgaaggtcgaagacaag
gacttcccctccacctgttcaaagaaaaaagcagatcgaaaaagcttctgtacaatccac
agcacaggctatttgaaaagctggccacccacaaagatggggttggatgaagacaatgaa
ccagacaacgagggctgtaacctcagctgccttgtcgcaattggacgactgcattctcat
gtggttccccaaacagtgaacggggaaatcagggtgaaatccatggagtacgtttctcgg
catgcaatagatgggaaatttgtctttgtagaccagagggcaacagctattctggcatat
ttaccacaagaactcctaggcacatcatgttatgaatattttcatcaagatgacatagga
catcttgcagaatgtcataggcaagttttacagacgagagacaagattacaactaattgc
tataagtttaaaatcaaagatggttctttcatcacactacgaagtcgatggttcagtttc
atgaacccctggaccaaggaagtagaatacatcgtctcaaccaacactgttgttttagcc
aacgtcctggaaggcggggatccaaccttcccgcagctcacaacgtcccctcacagcatg
gacagcatgctgccctctggagaaggtggcccaaagaggactcatcctactgttccagga
attccagggggaaccagggctggggcaggaaaaataggtcgaatgattgctgaggaaatc
atggaaatccacaggataagagggtcatcgccttccagctgtggctccagcccattgaac
attacaagtacgcctccccctgatgcctcctctccaggaggcaagaagattttaaacgga
gggactccagacattccttccagtggcctactgccagggcaggctcaagagaacccaagt
tatccatattctgatagttcttctattcttggtgaaaacccccacataggcatagacatg
atagacaacgaccaaggatcaagtagtcccagtaatgatgaagcagcaatggctgtcatc
atgagcctgttggaagcagatgctgggctgggtggccctgttgactttagcgacttgcca
tggccgctgtaa
DBGET
integrated database retrieval system
