Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101974881
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Entry
101974881 CDS
T10664
Symbol
Hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X2
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04950
Maturity onset diabetes of the young
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09160 Human Diseases
09167 Endocrine and metabolic disease
04950 Maturity onset diabetes of the young
101974881 (Hnf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101974881 (Hnf1a)
Transcription factors [BR:
iti03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
101974881 (Hnf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
KPBB_C
Motif
Other DBs
NCBI-GeneID:
101974881
NCBI-ProteinID:
XP_005336852
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MVAKLSQLQTELLAALLESGLSKEALIQALGEPGPYLLPGEGPLDKGEACGAGRGELAEL
PNGLGETRGSEDDTDDDGDDFTPPILKELENLSPEEAAHQKAVVETLLQEDPWRVAKMVK
SYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQFTHA
GQGGLIEEPTGDELPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAE
CIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTYSGPPSGPGPGPALP
AHSSPGLPPPALSPSKVHGVCYGQPATSEAAEVPSSSGGPLVTVSTPLHQVSPTGLEPSH
SLLSTEAKLVSATGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPA
SLGSTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMSPV
QSHVAQSPFMATMAQLQGPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTK
QVFASDTDASSESGLHAPASPATTIHIPSQDPASIQHLQPAHRLSASPTVSASSLVLYQS
SDSTNGHGHLLPSNHGVIETFISTQMASSSQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggtggccaagctgagccagctgcagaccgagctcctggccgcgctgctcgagtcgggc
ctgagcaaggaggcgctgatccaggccctgggggagccggggccctacctgctgcccgga
gagggtcccctggacaagggggaggcctgtggcgccggtcgaggggagctggctgagctg
cccaacgggctgggggagacgcggggctccgaggacgacacggacgacgacggggacgac
ttcacgccgcccatcctcaaagagctggagaacctcagccccgaggaggcggcccaccag
aaggccgtggtggagacccttctgcaggaggacccatggcgcgtggcgaagatggtcaag
tcctacctgcagcagcacaacatcccacagcgggaggtggtggacaccacgggcctcaac
cagtcccacctgtcgcagcacctcaacaagggcacccccatgaagacgcagaagcgcgcg
gccctgtacacctggtacgtccgcaagcagcgagaggtggcgcagcagttcacccatgca
gggcagggtgggctgattgaggagcccacaggtgacgagctgccaaccaagaaggggcgg
aggaaccgtttcaagtggggcccagcatcccagcagatcctgttccaggcctatgagagg
cagaagaaccccagcaaggaggagcgagagaccttggtggaggagtgcaacagggcggag
tgcatccagaggggagtgtcaccgtcgcaggcacaggggctgggttccaaccttgtcacg
gaggtgcgtgtctacaattggtttgccaaccggcgcaaagaagaagcctttcggcacaag
ctggccatggacacgtacagtgggcccccatcggggccaggcccaggacccgcgctgcct
gcccacagctcccctggcctgcccccacctgccctctcccccagtaaggtccacggcgtg
tgctatggacagcctgcaaccagtgaggcagccgaggtgccctcgagcagcggtggtccc
ctagtgacagtgtccacccctttgcaccaagtgtcccccacaggcctggagcccagccac
agcctgctgagcactgaagccaagctggtctcagccactgggggccccctgccacctgtc
agcacgctgacagcactgcacagcttggagcagacgtcgccgggcctcaaccagcagccc
cagaacctcatcatggcctcgctccctggggtcatgaccattgggcccggggagcctgcc
tccctgggctccacgttcaccaacacaggcgcctccaccctggtcattggcctggcctcc
actcaggcacagagtgtgccggtcatcaacagcatgggcagcagcctgaccaccctgcag
ccggtccagttctcgcagccgctgcacccttcctaccagcagcctctcatgtcacccgtg
cagagccacgtggcccagagtcccttcatggccaccatggcccaactgcagggtcctcac
gctctctacagccacaagcccgaggtggcccagtacacccacacaggcctgcttccacag
accatgctcatcaccgacaccaccaacctcagtgccctcgccagcctcacgcccaccaag
caggtcttcgcctcagacactgatgcctccagtgagtctgggcttcacgcgccagcctct
ccagccaccaccatccacatccccagccaggaccctgccagcatccagcacctgcagcct
gcccacaggctcagtgccagccccacagtgtccgccagcagcctggtgctgtatcagagc
tccgactccaccaacggccacggccacctgctgccatccaaccacggcgtcattgagacc
ttcatctccacacagatggcctcctcctcccagtga
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