Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101974973
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Entry
101974973 CDS
T10664
Symbol
Neo1
Name
(RefSeq) neogenin
KO
K06766
neogenin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04350
TGF-beta signaling pathway
iti04360
Axon guidance
iti04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101974973 (Neo1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101974973 (Neo1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101974973 (Neo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101974973 (Neo1)
Cell adhesion molecules [BR:
iti04515
]
Immunoglobulin superfamily
DCC/UNC5 family
101974973 (Neo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Ig_5
Fn3_VIN3
Tissue_fac
fn3_2
SusE
TMEM154
EphA2_TM
TM_ErbB1
Herpes_UL74
FAM176
Motif
Other DBs
NCBI-GeneID:
101974973
NCBI-ProteinID:
XP_040131337
LinkDB
All DBs
Position
Unknown
AA seq
1628 aa
AA seq
DB search
MTRELAKGRGARSGARMSWKAGNPAPLSGPWLPGPRPRGAGGSRHYPWKWAARAVRPGSG
RSARRGRPPPTGAVPGPSKGRAARYCFWRAHKSTRRTSANPGFLPEAVRPQVSGGAGLGR
EVGAGARHRLLWWRRLRCFLFRIQEQTCRNFFASAPVAEKKGDLAWREWSKREGPPPGPG
LGLRGSSSALCASIRTFTPFYFLVEPVDTLSVRGSSVILNCSAYSEPSPKIEWKKDGTFL
NLVSDDRRQLLPDGSLFISNVVHSKHNKPDEGYYQCVATVDSLGTIVSRTAKLTVAGLPR
FTSQPEPSSVYAGNSAILNCEVNADLVPFVRWEQNRQPLLLDDRIIKLPGGTLVISNVTE
GDGGLYRCIIESGGPPKYSDEAELKVLPDPEETLNLVFLKQPSSLVRVIGQSTVLPCVAS
GLPAPAMRWMKNEETLDTEGSERLVLLAGGSLEISDITEDDAGTYFCIADNGNETIEAQA
ELTVQAQPEFLKQPANIYAHESMDIVFECEVTGKPTPTVKWVKNGDMVIPSDYFKIVKEH
NLQVLGLVKSDEGFYQCIAENDVGNAQAGAQLIILEHDVAIPTLPPTSLTSATTDHLAPA
TTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSRP
GEMQVTIQNLMPATVYVFRVVAQNKHGFGESSAPLRVETQPEVQLPGPAPNIRAYATSPT
SITVTWETPLSGNGEIQNYKLYYMEKGTDKEQDVDISSHSYTLNGLKKYTEYSFRVVAYN
KHGPGVSTQDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPSPATQNGQITGYKIRY
RKASRKSDVTETLVTGTQLSQLIEGLDRGTEYNFRVAALTVNGTGPATDWLSTETFESDL
DETRVPEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRY
YTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHTDTSEVDLFVINAPYTPVPDPTP
MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTL
SYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPRTI
IVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQ
ARNSKGMGPMSEAVQFRTPKADSSDKMPNDQASGSSGKGSRLPDLGSDYKPPMSGSNSPH
GSPTSPLDSNMLLVIIVSVGVITIVVVVIIAVFCTRRTTSHQKKKRAACKSVNGSHKYKG
NSKDVKPPDLWIHHERLELKPIDKSPDPNPIMTDTPIPRNSQDITPVDNSMDSNIHQRRN
SYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQPVISAHPIHSLDNPHHHFHSSSLASP
ARSHLYHPGSPWPVGTSMSLSDRANSTESIRNTPSTDTMPASSSQTCCTDHQDPEGATSS
SYLASSQEEDSGQSLPTAHVRPSHPLKSFAVPAIPPPGPPTYDPALPSTPLLSQQALNHH
IHSVKTASIGTLGRSRPPMPVVVPSAPEVQETTRMLEDSESSYEPDELTKEMAHLEGLMK
DLNAITTA
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgaccagagaattagccaagggtcgcggagctcgctctggagctcgcatgagttggaaa
gctggaaatccagcacctttgtctgggccctggctccctggaccccggccccgtggtgcg
ggcgggtcccggcactacccctggaaatgggcggcgagggcggtccggcctggaagcggg
aggtcagcgcggcgcggacggccccctcccacaggagctgtgccaggtcccagcaagggc
cgggcggctcgctattgtttttggcgagcacataagtccacgcgccgaacctctgcgaac
ccaggtttcctcccggaggccgttcgtccccaggtaagcggaggcgcgggcctggggcgc
gaggtgggggcaggggcgcggcaccggctcctgtggtggcggcggctgcggtgttttttg
tttaggatccaggagcaaacgtgcaggaacttctttgcctcggctccagtggccgagaag
aaaggggatcttgcgtggcgagagtggtctaagcgggaggggccgcctccggggccaggt
ctggggctccgggggtctagttctgcgctttgtgccagcattcgaacattcactccattt
tattttctggtggaaccagtggatacactctcagttagaggctcctctgttatattaaat
tgttcagcatactctgagccttctccaaaaatcgaatggaaaaaagatggaactttttta
aacttagtatcagatgatcgacgccagcttcttccagatggatctttatttatcagcaat
gtggtgcattccaaacacaataaacctgatgaaggctattatcagtgtgtggccactgtt
gatagtcttggaactattgtcagcagaacagccaagctgacagtagcaggacttccaaga
tttaccagtcaaccagaaccttcttcagtttatgctgggaacagtgcaattctgaattgt
gaagttaatgcagatttggttccatttgtgaggtgggaacagaacagacagcctcttctt
ctggatgacagaattatcaaacttccaggtggaacgctggttatcagtaatgtgactgaa
ggagatgggggactatatcgctgcataattgaaagtggtggaccaccaaagtacagtgat
gaagctgaattgaaagttcttccagatcccgaggaaacactcaacttggtatttttgaaa
caaccttcttccttagtcagagtcattggtcagagcacagtgttgccatgtgttgcttca
ggacttcctgcaccagccatgagatggatgaaaaatgaggagacacttgacacagaaggc
tctgaaagattggtcttgctggcaggtggtagtctggaaatcagtgatatcactgaggat
gatgctgggacttatttttgtatagctgataatggaaatgaaacaattgaagctcaagca
gagcttacagtgcaagcccaacctgagttcctgaaacagcctgctaatatatatgctcat
gaatccatggatattgtatttgaatgtgaagtgactgggaaaccaactccaactgtgaag
tgggtcaagaatggggatatggttatcccaagtgattactttaaaattgtaaaggaacat
aatcttcaagttttgggtctggtgaaatcagatgaagggttctatcaatgcattgctgag
aatgatgttggaaatgcacaagctggagctcaactgataatccttgaacatgatgttgcc
atcccaacattacctcccacttcactgaccagtgccactactgaccatctagcaccagcc
acaacgggaccactgccttcagctcctcgggatgtcgtggcctccctggtctctacccgc
ttcatcaaattaacatggcgaacacctgcatcagatcctcatggagataacctcacctat
tctgtattctacaccaaggaaggaattgctagggaacgtgttgagaataccagtcgccca
ggagagatgcaggtaaccattcaaaatctaatgccagcgactgtgtacgtctttagagtt
gtggctcaaaataaacatggcttcggagagagttcagctccactacgagtagaaacacag
cctgaagtccagctccctggcccagcacctaacatccgagcttatgcaacatctcctact
tccatcactgtcacatgggaaaccccgttgtctggcaatggggaaattcaaaattacaaa
ttgtactacatggaaaaaggaactgataaagaacaggatgttgatatttcaagtcactcc
tacactcttaatggattgaaaaaatatacagagtatagtttccgagtagtggcctacaat
aaacatggtcctggagtctccacacaggatgttgctgttcgaacattgtcagatgttccc
agtgctgctcctcagaatctatccttagaagttagaaattcaaagagtattatgattcac
tggcagccaccttctccagccacacagaatgggcagattactggctacaagattcgctac
cgaaaggcctcccgaaaaagtgatgtcactgagaccttggttactgggacacaactttct
cagctgatcgaaggtcttgatcgggggactgaatacaatttccgagtagctgctttaaca
gtcaatggtacaggcccggcaactgactggctgtctactgaaacatttgaaagtgactta
gatgaaactcgtgttcctgaagtgcctagctctcttcatgtccgcccgcttgtcacgagc
attgtagtaagctggactcctccagagaatcagaacattgtggtcagaggttatgccatt
ggttatggcattggcagccctcatgcccagactatcaaagtggactataaacagcgctat
tacaccattgaaaatctggatccaagctctcactatgtgattaccctgaaagcgtttaac
aacgtgggtgaaggcatccccttgtacgaaagtgctgtgaccaggcctcacacagacact
tctgaagttgatttatttgttattaatgctccatacactccagtgccagatcccactccc
atgatgccaccagtgggagttcaggcttccattctgagtcatgacaccataaggattaca
tgggcggacaactcactgcccaaacatcagaagattacagactcccggtactacacagtt
cgatggaaaaccaacatccctgcaaacaccaagtacaagaatgcaaatgcaacgacttta
agttacttggtgactggtttaaaaccaaatacactctatgaattctctgtgatggtgacc
aaaggtcgaagatcaagcacatggagtatgacagcacatgggaccacctttgaattagtt
cctacttctccacctaaagatgtaacagttgtgagtaaagagggaaaacctaggaccata
attgtgaactggcagcctccttcagaagccaatggcaaaattacaggttatatcatatat
tacagtacagatgtgaatgcagagatacatgactgggttattgagcctgttgtgggaaac
aggctgactcaccagattcaagagttaacacttgacacaccatactacttcaaaatccag
gctcggaattcaaagggcatggggcccatgtctgaagctgtccagttcagaacacctaaa
gcggactcctctgataaaatgcctaatgatcaagcctcagggtcttcaggaaaaggaagc
cggctgccagacctgggatctgactacaaacctccaatgagtggaagcaacagccctcat
ggcagccccacctctcctctggacagtaacatgctgctggtcatcatcgtttctgttggt
gtcatcaccattgtggtggttgtgatcattgctgtcttttgcacaaggcgtaccacatct
caccagaaaaagaaacgagctgcatgcaaatcagtgaatggctcccacaagtacaaaggg
aactccaaagatgtcaaacctccagacctgtggatccaccatgagagactggagctgaaa
cccatcgataagtctccagacccaaatcccatcatgaccgatacgccaattcctcgaaat
tctcaagatatcacacctgttgacaattccatggacagtaatatccatcaaaggaggaac
tcatacagagggcatgaatcagaggacagtatgtctacactagctggaaggcggggaatg
agaccaaaaatgatgatgccctttgactctcaaccaccccagcctgtgattagtgcccat
cccatccattccctcgataaccctcaccatcatttccactccagcagcctcgcttctcca
gctcgcagtcatctctaccacccgggcagcccatggcccgttggcacatccatgtccctt
tcagacagggccaattccacagaatctattcgaaatactcccagcactgacaccatgcca
gcctcctcatctcagacatgctgtactgatcatcaggatcctgaaggtgctaccagctcc
tcttacttggccagctcccaggaggaagattcagggcagagtcttcccacagcccatgtt
cgtccttcccacccattaaagagcttcgctgtgccagcaatcccacccccaggacctccc
acctatgatcctgcattgccaagcacaccattattatcccagcaagctctgaaccatcac
atccactcagtgaagacagcttccatcggaactttaggaaggagccggcctcctatgcca
gtggttgttccaagtgcccctgaagtacaggagaccacaaggatgctggaagactctgag
agtagctatgaaccagatgagctgaccaaagagatggcccacctggaaggactaatgaag
gacctaaatgccattacgacagcatga
DBGET
integrated database retrieval system
