Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101974985
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Entry
101974985 CDS
T10664
Symbol
Itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04145
Phagosome
iti04148
Efferocytosis
iti04151
PI3K-Akt signaling pathway
iti04510
Focal adhesion
iti04512
ECM-receptor interaction
iti04810
Regulation of actin cytoskeleton
iti04820
Cytoskeleton in muscle cells
iti05165
Human papillomavirus infection
iti05205
Proteoglycans in cancer
iti05410
Hypertrophic cardiomyopathy
iti05412
Arrhythmogenic right ventricular cardiomyopathy
iti05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101974985 (Itgb5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101974985 (Itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101974985 (Itgb5)
04148 Efferocytosis
101974985 (Itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
101974985 (Itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101974985 (Itgb5)
04810 Regulation of actin cytoskeleton
101974985 (Itgb5)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
101974985 (Itgb5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101974985 (Itgb5)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
101974985 (Itgb5)
05412 Arrhythmogenic right ventricular cardiomyopathy
101974985 (Itgb5)
05414 Dilated cardiomyopathy
101974985 (Itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101974985 (Itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101974985 (Itgb5)
Membrane trafficking [BR:
iti04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
101974985 (Itgb5)
Cell adhesion molecules [BR:
iti04515
]
Integrins
Integrin beta subunits
101974985 (Itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
Integrin_b_cyt
PSI_integrin
EGF_2
I-EGF_1
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
SCO4226-like
Motif
Other DBs
NCBI-GeneID:
101974985
NCBI-ProteinID:
XP_005338932
UniProt:
A0A287CYP1
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MPRAPAPLYACLLGLCALVPPLPGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSV
TSRCDLRANLIRNGCGGEIESPASSARVLRNLPLSSEGSSAAGSDVIQMAPQEIAVSLRP
GDQTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG
SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
RNRDAPEGGFDAVLQASVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
HGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEDLKIGD
TASFEVSVEARSCPSRPVEHAFTLRPVGFRDSLQVRVTYNCTCGCSAGLEPDSARCSGNG
TYICGLCECNPSYLGTRCECQEGENQSVYQNLCREAEGKPLCSGRGECSCNQCSCFESEF
GKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCQAKDGQ
ICSNRGNCICGQCQCTEPGAFGETCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCQHL
CKDEVITWVDTIVKDDQEAVLCFYKTAKDCIMTFSYADLPSGKTNLTVLREPECGTAPNA
MTILLAVVGSILLIGIALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST
HTVDFTFNKFNKSYNGTVD
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggccccggcgcccctgtacgcctgcctcctcgggctttgcgcgctcgtgccg
ccgctcccagggctcaacatttgcaccagtggaagtgccacctcgtgtgaagaatgtctg
ctaatccacccaaaatgtgcctggtgctccaaagaggactttggcagcccacggtcagtc
acttcccggtgtgatttgagggcaaatctcatccgaaatggctgcggaggtgagatcgag
agcccggccagcagcgcccgtgtcctgcggaacctgcctctcagcagcgagggctccagt
gctgcaggctccgatgtcattcagatggcgccacaggagattgccgtgagcctccggcct
ggtgaccagaccaccttccagctgcaggttcgccaggtggaggactatcctgtggacttg
tactacctgatggacctctccctgtccatgaaggatgatttggacaacatccgaagcctg
ggcaccaagctcgctgaggagatgagaaagctcaccagcaacttccggttgggctttggg
tcttttgttgacaaggacatctctcccttctcctacacggcaccgagataccagaccaat
ccatgcattggttacaagttatttccaaactgcgtcccctcctttgggttccgccatctg
ctgcctctcactgacagagtcgacagcttcaatgaggaagttcggaagcagagggtgtcc
cgcaaccgagatgccccggagggaggctttgatgcagtcctccaggcatctgtctgcaag
gagaagatcggctggcgaaaggacgccctgcacttgctggtgttcacaacggacgatgtg
ccccacatcgcactggatggaaaactggggggcctggtgcagccacatgatggccagtgt
cacctgaatgaggccaacgagtacactgcatccaatcagatggactatccgtcccttgcc
ttgcttggagagaagctggcagagaacaacatcaacctcatttttgcagtgacgaaaaac
cactatatgctctacaagaattttacagccctgatacctgggaccacagtggagatttta
catggagattccaagaacatcattcagctgattatcaatgcatacaatagtatccggtct
aaggtggagctgtcggtctgggatcagcctgaggatctcaatctcttcttcactgccacc
tgccaagatggcgtatcctacccaggacagaggaagtgtgaagacctgaagattggggac
acggcgtcctttgaggtgtcagtggaggcccggagctgccccagcagacccgtggagcac
gcgttcaccctgcggcctgtggggttccgggacagcctgcaggtgagggtcacctacaac
tgcacctgcggctgcagcgcggggctggagcccgacagcgccagatgcagtgggaacggg
acctacatctgcggcctctgcgagtgcaaccccagctacctgggcaccaggtgcgagtgc
caggagggggagaaccagagcgtgtaccagaacctgtgccgggaggcagagggcaagccg
ctgtgcagcgggcgaggtgagtgcagctgcaaccagtgctcctgcttcgagagcgagttc
gggaagatctacgggcctttctgcgagtgcgataacttctcctgtgccaggaacaagggc
gtcctctgctcaggccatggtgagtgtcactgcggagaatgcaagtgccatgcaggttac
attggggacaattgtaactgctcaacagacatcagcacgtgccaggccaaggatgggcag
atctgtagcaaccgtggaaactgcatctgtgggcaatgccagtgcacagagcccggagcc
tttggggagacatgtgagaagtgtccaacctgcccagacgcttgcagcaccaagagagat
tgcgttgagtgcttgctgcttcactcagggaaacctgacaatcagacctgccagcacctg
tgcaaggacgaggtgatcacgtgggtggacaccatcgtcaaagatgaccaggaggctgtg
ctttgcttctataaaactgccaaggactgcatcatgacgttcagctacgcagacctgccc
agcgggaagaccaacctgacggtgctgagggagccagagtgtgggactgcccccaacgcc
atgaccattttgctggccgtggtcggcagcatcctcctgattgggattgcactcctggcc
atctggaagctgcttgtcaccatccatgaccgaagagaatttgccaagttccaaagtgaa
cgctccagggcgcgctatgagatggcttcaaaccccctctacagaaagcccatctccact
cacaccgtggatttcaccttcaacaagttcaacaaatcctacaacggcaccgtggactga
DBGET
integrated database retrieval system
