KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101975020
Entry
101975020         CDS       T10664                                 
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING2-like
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    101975020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:iti04121]
    101975020
   03036 Chromosome and associated proteins [BR:iti03036]
    101975020
Enzymes [BR:iti01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101975020
Ubiquitin system [BR:iti04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101975020
Chromosome and associated proteins [BR:iti03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     101975020
    Noncanonical PRC1 (PRC1.1)
     101975020
    Noncanonical PRC1 (PRC1.3/1.5)
     101975020
    Noncanonical PRC1 (PRC1.6)
     101975020
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-Nse zf-RING_5 RING_XB3-XBAT31 zf-RING_6 zf-RING_4 zf-rbx1 zf-C3HC4_5 TRAF3_RING zf-UDP zf-MIZ
Other DBs
NCBI-GeneID: 101975020
NCBI-ProteinID: XP_040126850
LinkDB
Position
Unknown
AA seq 266 aa
MEDRRPQLMSDSTALGPEKFQEGKKAACGLGGKKRPAEPRAGIGATRSQALQTNGTQPLS
KTWELSLYELQQTSQEAITDDLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCAD
CIITALRSGNKECPTCQKKLVSKRSLRPDTNFDALISKIYPSHDEYEAHQERVLARINKH
NSQQALSHSIEEGLKIQAMNRLQXGKEQQIENGSGTEDNGDSSHCSNASTHRNQETGPSN
KWTKTSDDSGLELDNNNATVAIDPVI
NT seq 801 nt   +upstreamnt  +downstreamnt
atggaggacaggaggcctcagctcatgtctgactccacagcactgggaccagagaaattc
caggaagggaaaaaggctgcctgtggactgggaggtaagaagcggccagcagagccccgg
gctgggataggagccacaaggtctcaggctttgcagacaaatggaactcaaccattaagc
aaaacatgggaactcagtttatatgaattacaacaaacatctcaggaggcaataacagat
gacttggagattgtggtttctcccagaagtctacacagtgaattaatgtgcccaatttgt
ttggatatgttgaagaacaccatgactacaaaggagtgtttgcatcgtttttgtgcagat
tgtataatcacagcccttagaagtggcaacaaagaatgtcctacttgtcagaaaaagcta
gtttccaaaagatcactaaggccagatacaaactttgatgcactcatcagcaaaatttat
ccaagtcatgatgagtatgaagctcatcaagagagagtattagccaggatcaataagcac
aatagtcaacaggcactcagtcacagcattgaggaaggactgaagatacaggccatgaac
agattacagtgaggcaaggaacagcagattgaaaatggcagtggaacagaagataatggt
gacagttcacattgtagtaatgcatccacacatagaaatcaggaaacaggccctagtaac
aaatggaccaaaacatctgatgattctgggcttgaacttgataataacaatgcaacagtg
gcaattgatccagtaatttaa

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