Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101975204
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Entry
101975204 CDS
T10664
Symbol
Myo5b
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101975204 (Myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101975204 (Myo5b)
04131 Membrane trafficking [BR:
iti04131
]
101975204 (Myo5b)
03029 Mitochondrial biogenesis [BR:
iti03029
]
101975204 (Myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
iti04812
]
101975204 (Myo5b)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
101975204 (Myo5b)
mRNA cycle factors
P-body specific factors
101975204 (Myo5b)
Membrane trafficking [BR:
iti04131
]
Others
Actin-binding proteins
Myosins
101975204 (Myo5b)
Mitochondrial biogenesis [BR:
iti03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
101975204 (Myo5b)
Cytoskeleton proteins [BR:
iti04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
101975204 (Myo5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
nSTAND3
Myosin_N
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
101975204
NCBI-ProteinID:
XP_040126199
LinkDB
All DBs
Position
Unknown
AA seq
1856 aa
AA seq
DB search
MRFCLDELDPRGSSSTVQHHNITEYTRVWIPDPDEVWRSAELTKDYKEGEKSLQLKLEDE
TIREYPVDAQNNQLPFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGI
VLVAINPYEQLPIYGQDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGES
GAGKTVSAKYAMRYFATVGGSASETNIEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQ
IGFDKRYHIIGANMRTYLLEKSRVVFQADDERNYHIFYQLCAAASLPEFKELALTCAEDF
FYTSQGGDTAIEGVDDAEDFEKTRQAFTLLGVRESHQISIFKIIASILHLGSVEIQAERD
GDSCSISPQDEHLSNFCRLLGVEHNQMEHWLCHRKLVTTSETYVKTMSLQQVINARNALA
KHIYAQLFGWIVEHINKALHTSIKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQ
FNLHVFKLEQEEYMKEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWA
QKLYDRHSSSQHFQKPRMSNTAFIVVHFADKVEYLSDGFLEKNRDTVYEEQINILKASKF
PLVADLFRDDKDPIPATSTSGKGSSSKINIRSARPPMKASNKEHKKSVGHQFRTSLHLLM
ETLNATTPHYVRCIKPNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFF
NRYRVLVKKRELANTDKKAICRSVLESLVKDPDKFQFGRTKIFFRAGQVAYLEKLRADKF
RAATIMIQKTVRGWLQKVKYRRLKRATLTLQKYCRGYLARRLAEHLRRTRAAVVLQKQYR
MRRTRLAYQRVRRAAIVIQAFARAMFVRRIYRQVLMEHKATIIQKHARGWMARRHFQRLR
AAAIVIQCAFRRLKAKQELKALKIEARSAEHLKRLNVGMENKVVQLQRKIDDQNKEFKTL
SEQLSAVTSMHTMQVEKLKRELAHYQQNQGADASLQLQEEVQSLRTELQRAHSERRVLED
AHSREKDELRKRVADLEQENALLKDEKEQLNNQILCQSKDEFAQNSVKENLLMKKELEEE
RSRYQNLVKEYSRLEQRYDNLRDEVTILKQTPGHRRNPSNQSSLESDSNYPSISTSEIGD
TEDALQQVEEIGVEKAAMDMTVFLKLQKRVRELEQERKKLQVQLEKREQDSKKVQMEQPR
NDVDLDQDADLAYNSLKRQELESENKKLKNDLNELRKAVADQATQNNSSHSSPDSYSLLL
NQLKLANEELEVRKEEVLILRTQIVNADQRRLAGKSMEPNINARASWPNSEKHVDQEDAI
EAYHGVCQTNSQTEDWGYLNEDGELGLAYQGLKQVARLLEAQLQAQSLEHEEQVENLKAQ
VEALKEEMDKQQQTFCQTLLLSPEAQVEFGVQQEISRLTNENLDLKELVEKLEKNERKLK
KQLKIYMKKVQDLEAAQALAQSDRRHHELTRQVTVQRKEKDFQGMLEYHKEDEALLIRNL
VTDLKPQMLSGTVPCLPAYILYMCIRHADYTNDDLKVHSLLTSTINGIKKVLKRLRSCTE
AKRRRISVTPIFPLQGFMTQNTAKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIKIAEGL
LQPMIVSAMLENESIQGLSGVKPMGYRKRSSSMADGDNSYCLEAIIRQMNCFHTVMCDQG
LDPEIILQVFKQLFYMITAVTLNNLLLRKDVCSWSTGMQLRYNISELEEWLRGRNLHQSG
AAQTMEPLIQAAQLLQLKKKTHEDAEAICSLCTSLSTQQIVKILNLYTPLNEFEERVTVS
FIRTIQAQLQERNDPQQLLLDSKHMFPVLFPFNPSSLTMDSIHIPACLSLEFLNEV
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atgaggttctgtctggatgaattggatccaagaggtagtagctccactgtgcagcatcat
aacataacggagtacacaagggtctggatccctgacccggatgaagtgtggcgctcagct
gaattaaccaaggactacaaagagggtgagaagagcctccagctcaaactggaagatgag
actattcgggaatatccagttgacgcccagaacaaccagctacccttcttacggaatccg
gatatcttggtgggagaaaacgacctcactgccctcagctatctccatgagcctgcagtt
ttgcataatctgaaggtccgcttcctggagtccaaccacatttacacttactgtggcatt
gtgcttgttgccatcaacccttacgaacagttgccaatctatgggcaagatgtcatctac
gcctacagtggtcagaacatgggtgacatggatccccacatctttgcagtggcagaagaa
gcctacaagcagatggccagagatgagaagaaccagtccatcatagtcagtggggagtcg
ggcgctgggaagacggtgtcggccaagtatgccatgcgctactttgccacggtcggtggc
tcagccagtgaaaccaacatcgaggagaaggtcctggcgtccagtcccatcatggaggcc
atcgggaatgccaaaaccactcggaatgacaacagcagccgctttggaaagtacattcag
atcggctttgacaaaaggtaccacatcattggggccaacatgaggacctacctgttggag
aagtccagagtcgtctttcaggcagatgatgagaggaattaccatatcttctaccagctc
tgtgctgccgccagtctcccagaatttaaagagcttgcactaacatgtgcagaggacttt
ttctatacatcccagggaggagacacagccatcgagggtgtagatgacgcagaggacttt
gagaagactcggcaagctttcacacttcttggagtgagagagtcccatcagataagcatt
tttaagataattgcttctatcctgcacctgggaagtgtggagattcaggctgagcgggat
ggtgattcctgtagcatatcaccccaggatgaacacctaagcaacttctgccgcctgcta
ggggtggagcacaaccagatggagcactggctgtgccatcgcaagctggtcaccacctca
gagacctatgtcaagactatgtccctgcagcaggtcatcaatgcacgcaatgccctggcc
aaacacatctacgcccagctgtttggctggattgtggagcacatcaacaaggccctgcac
acctccatcaagcagcactccttcatcggggtcctggacatctatgggtttgaaactttt
gaggttaacagcttcgagcagttttgtatcaactatgccaatgagaaactccagcagcag
ttcaacttgcatgtgttcaaactggagcaagaagaatacatgaaggagcagatcccttgg
accttgattgacttttatgataaccaaccttgcatcgacctcatagaggctaagttgggt
atcttggacctcttggatgaagaatgtaaggtccccaaaggaactgaccagaactgggcg
cagaagctctacgaccggcactccagcagccagcacttccagaagccccgcatgtccaac
acggccttcattgtggtccacttcgcagataaggtggagtacctctcagatggttttctg
gagaaaaacagggacacagtgtatgaagagcagatcaacatcctgaaggccagcaagttc
ccattagtggccgacttgtttcgtgatgacaaggaccctattcctgccaccagcacatca
gggaagggatcgtcttcgaagatcaacattcgctctgccagaccccccatgaaggcctcc
aacaaggaacacaagaaatctgtgggccaccagttccgcacctccctgcatcttctcatg
gagaccctgaatgccaccaccccacattatgttcgctgcatcaagcccaacgatgagaag
ctccccttccactttgacccaaagagagccgtgcagcagctcagagcctgtggggtgttg
gagacgattcgcatcagtgcagctggctacccatccaggtggacctaccatgacttcttc
aaccggtaccgagtgctggtgaagaagagggagcttgccaacacagacaagaaggccatc
tgcaggtctgtcctggagagcctcgtcaaggatcctgacaagttccagtttggccgcacc
aagatcttctttcgggcaggccaagtggcctacctggagaaattgcgggccgacaagttc
cgagcagccaccatcatgatccagaaaaccgtccggggctggctgcagaaggtgaagtac
cgcaggttgaagagggccaccttaaccttgcagaagtactgccgaggatacctggcccgc
aggctggctgagcacctgcgaaggactcgggcagcagtggtgctccagaagcagtaccgc
atgcggaggacccgcctggcttaccagagagtgcgcagggctgccatcgtcatccaggcc
tttgctcgggccatgttcgtgcgcagaatctaccgccaggtcctcatggagcacaaggcc
accatcatccagaagcacgcccgggggtggatggcacgcaggcatttccagcggctgcgg
gctgcagccatcgtcatccagtgtgccttccggaggctcaaggccaagcaggaactgaag
gccctcaagatcgaggcccgctcagcagagcacctgaaacgcctcaatgtgggcatggag
aacaaggtggtccagctgcagcggaagattgatgaccagaacaaagagttcaagaccctg
tcggagcaactgtcggcggtcacctccatgcacaccatgcaggtggagaagctgaagagg
gagctggcgcattaccagcagaaccagggggccgatgccagcctgcagctgcaggaggag
gtgcagagcctgcgcacggagctgcagagagcccactcagagcgtagggtcctggaggat
gcccacagcagggagaaggacgagctgagaaagagagttgcagacctggagcaagaaaat
gctctcctgaaagatgagaaagaacagctgaataaccaaattctgtgccaatctaaagat
gaatttgcacaaaactccgtgaaggagaaccttctgatgaagaaggagctggaggaggag
cgttcccggtaccagaacctggtgaaggaatattcccggttggagcagagatacgacaac
ctgcgggatgaggtgaccattctaaagcaaaccccaggtcataggcggaacccatcaaac
caaagtagcttagaatctgactccaattacccctccatatccacatctgagatcggagac
actgaggatgccctccagcaggtggaggaaattggcgtggagaaggcagccatggacatg
acagtgttcctgaagctgcagaagagggtgcgggagctcgagcaggagaggaagaagctg
caggtgcagctggagaagagagagcaggacagcaagaaagtccagatggaacaaccaagg
aatgatgtagatttggaccaggatgcagatctggcctacaatagtctgaagaggcaggag
ctggagtcggagaacaagaagctgaagaatgacctgaatgagctgaggaaagcagtagct
gaccaggccacacagaacaactcctcccacagctcccctgacagctacagcctcctcctg
aaccagctcaagctggccaacgaggagctggaggtccgaaaagaggaggtgctcatcctc
aggacccagatcgtgaacgctgaccagcgccgacttgctggcaagagcatggagccaaac
attaatgccagagcaagttggcctaacagtgaaaagcatgtggaccaggaagatgccatt
gaggcctatcatggggtctgccagacaaacagccagactgaggattggggatacttgaat
gaagatggagaactcggcttggcctaccaaggcttaaaacaagttgccaggttgctggag
gcacagctgcaggcccagagcctggagcatgaggaacaggtggagaacctcaaggcccag
gtggaggccctgaaggaggagatggacaaacagcagcagaccttctgccagacactgctg
ctatccccagaggcccaggtggaatttggcgtccagcaggagatatcccggttgaccaac
gagaatctggaccttaaagaactggtagaaaagctggaaaagaatgagaggaagctcaaa
aagcaactgaagatttacatgaagaaagtccaggacctagaagctgcccaggcattggcc
cagagtgacagacggcaccatgagctcaccagacaggtcacagtccagaggaaagagaag
gacttccagggcatgctggagtaccacaaagaagacgaggccctcctcatccggaacctg
gtgacagacctgaagccccagatgctgtctggcacagtgccctgcctccccgcatacatc
ctctacatgtgcatcagacacgcggactacaccaatgacgacctcaaggtgcactccttg
ctcacctccaccatcaatggcattaagaaagtcctaaagaggctcagaagttgtactgag
gccaagagacgcagaatctcagtaacaccgatctttcctctccagggcttcatgactcag
aacaccgcaaagcagaatgaacattgtcttaagaactttgacctcactgaataccgtcaa
gtgctgagcgacctttccattcagatctaccagcagctcattaaaatcgctgagggcttg
ttgcagccaatgatagtttctgccatgttggaaaatgagagcattcagggtctatctggt
gtgaagccaatgggctaccggaagcgctcctccagcatggcagacggggataactcatac
tgcctggaagccatcatccgccagatgaattgctttcacaccgtcatgtgtgaccaaggc
ctggaccctgagatcatcctgcaagtgttcaaacagctcttctacatgatcaccgcagtg
actcttaacaacctgctcctacggaaggacgtctgctcatggagcacaggcatgcaactc
aggtataatataagtgagcttgaagagtggcttcggggaaggaaccttcaccagagcgga
gcagctcagaccatggaacctctgatccaagccgcccagctcctgcagttaaagaagaaa
acccacgaggacgcggaggccatctgttctctgtgtacctccctcagcacccagcagatc
gtcaaaattttaaacctttatacacccctgaatgaatttgaagagcgagtaacagtgtcc
tttatacgaacaatccaagcacaactacaagagcggaatgaccctcagcaactgttgtta
gactccaaacacatgtttcctgttttgtttccatttaatccatcttccctgacgatggac
tcaatccacatccccgcgtgtctcagcctggagttcctcaatgaagtctga
DBGET
integrated database retrieval system
