Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101975265
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Entry
101975265 CDS
T10664
Symbol
Stab1
Name
(RefSeq) stabilin-1 isoform X1
KO
K19020
stabilin-1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04148
Efferocytosis
Brite
Glycosaminoglycan binding proteins [BR:
iti00536
]
Hyaluronan
Cell surface receptors
101975265 (Stab1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101975265
NCBI-ProteinID:
XP_013217053
LinkDB
All DBs
Position
Unknown
AA seq
2584 aa
AA seq
DB search
MAEPRGLLLLCVLVSCLANSSFIRGQKVQFKRCDIKTTLVKHTPCTTCAAIKKQVCPSGW
RRFPEKISQDCSYEIKLGDTVMSKSGCNLECWKEVVQKACCPGYWGSQCYECPGGAETPC
NGHGTCLDGMARNGTCACQENFSGSACQECRDPHRFGPDCQSVCSCVHGVCKSGPLGDGS
CLCFAGYTGPRCDQELHVCQALSCPQHTQCSAEDPTCKCLPGYTQQGSVCLAPNPCQPSP
CSPLARCSVSPNGKAQCHCPENYHGDGKVCLPQDPCTIDFGGCPSNSTLCLYQSPGKATC
SCQPGLISINNNASMGCFAVCYSYSCDLSATCQLTPEGKTRCVCKEDEVGDGRACYGHLL
SEVQKARQTGLMVMQLRVAISMFEQGCQEILTSSGPFTVLVPSIIFSRFFTTKTMIPLLA
QKLCRQYIIPGQHMLQDLGLQSTHTWWTLAGKEITVTNNRLRYSYVYKDQPQKTFNIQKA
NYIAANGIFHVVSYLRWELPSETSRDPKNPHEDSSQQKTIGQILASTEAFSRFEIILENC
GLPSILDGPGPFTVFVPSNEAVDSLRDGRLIYLFTAGLSKLQELVKYHIYNHGQLTVEKL
ISKGRVLTMANQVLNVNISEEGRILLGPKGVPLRRVDVLASNGVIHVLEGILLPPTILPI
LPKHCGEDQYNIVAGSCVDCQALNTSTCPPNSVKLDIFPKECIYIHDPMGLNVLKKGCAR
YCNQTVTKLGCCKGFFGPDCTQCPGGFSNPCYGKGNCSDGIQGNGACLCFPDYKGLACHI
CSNPNKHGDQCQEDCGCVHGLCDNRPGSGGVCQHGTCAPGFRGRFCNESVEDCGPTGLAK
HCHLNARCVSQEGVARCVCLDGFEGDGYSCTRSHPCSRPDRGGCSENAECVPGDKGTHHC
TCHRGWSGDGRVCVAIDECGLDTRGGCHADALCSYVGPGQSRCTCKLGFAGDGYECSPID
PCRAGNGGCHGLATCQAVGGGQRICKCPPGFGGDGLSCYGDIIRELQANAHFSAFSQWFQ
NASITLPANGQVTALVPSESAIRRLNPEDRAFWLQPKMLPHLVRAHFLQGALSEEELAQL
DRQNVTTLDPTTRWEIRNISGRVWVQNASVDVADLLATNGVLHILSQVLLPSRADVQGGQ
GLLQQLDLVPAFRLFRELLQRHGLVPQIEAATAYTIFVPTNSSLEAQSNGSSLNADTVRH
HVILGEALSVEALRKGGHRNSLLGSAHWLVFYNHSGQPEVNHVPLEGPLLEAPGSSLFGL
SGILTVGSSRCLHSHAEALREKCINCTGKFRCTRGFQLQDTPRKSCVYRSGFSFSRGCSY
TCVKKIQVPDCCPGFFGILCEPCPGGLGGVCSGHGQCQDRLLGSGECRCHEGFHGTACEM
CELGRYGPSCAGVCDCAHGMCQEGLQGDGSCVCNVGWQGLRCDQKIVDPQCPKKCDPNAN
CIQNSTGPPTCVCAAGYSGNGSYCSEVDPCANGHGGCSPHANCTKVAPGQRTCTCQDGYT
GDGELCQEINSCLIRNGGCHIHAECIPTGPQQVSCSCHEGYSGDGIRTCDLLDPCSQNNG
GCSPYATCKSTGDGQRTCTCNRIQTVGDGFTCRARLSLELFRDKHASFFSRHLLEYTELK
GNGPFTVFVPQADLMTNLSQNELARIRANRQLVFRYHVVGCQQLHTQELLDQGYATALSG
HTLRFSEREGSIYLNDFARVVSSDHEAVNGILHFIDRVLLPPEVLHWEPDATPIPSPPRN
VTDAAESFGYKIFSHLVTVAGLLPMLRDVSHRPLTMLWPTDSALQALPPDRQAWLYHEDH
RDKLAAILRGHVIRNVEALASDMPNLGSLRTMHGTPISFSCSRARPGELMVGEDDARIVQ
RYMPFEGGLAYGIDQLLEPPGLGARCDRFETRPLRLKTCSICGLEPPCPEGSWEQGSPET
CWRYYAKLWSSPSLHSLALGNIWVRPSFWSHPQGKSRGCHRNCVTTTWVPSCCPGHYGSE
CQACPGSPRSPCNGHGVCLDGMSGSGRCRCHSGFTGTACELCTSGFFGPQCQACSCTSHG
RCDEGLGGSGSCFCDEGWTGPRCEVQLELQPVCTPPCAPQAMCRAGNSCECSLGYEGDGR
VCTVADLCQDGRGGCSEHANCSQVGTVVTCVCLPDYEGDGWSCRARNPCADGHHGGCSEH
ADCLNTGPNTRRCECHAGYVGDGLQCLEEAAPPVDRCLGHPSPCHTDAVCTDLHFQEKRA
GVFHLQATSGPYGLNFSEAEAACADQGAVLASVSQLSAAQQLGFHLCLMGWLANGSAAHP
VVFPAADCGDGRVGVVSLGVRKNLSEPWDAYCYREQDVACQCKAGFVGDGISICNGKLLD
VLAATANFSTFYGMLLGYANATQKGFDFLRFLDDELTYKTLFVPVNEGFVDNMTLSGPDL
ELHASNATFLSTNASQGTLLPAHSGVSLVISDTGPGNNSWAPVAPGAVLVGRVIIWDIMA
FNGIIHALASPLLAPPQPGAVLAPEAPQVAAGVGAVVAAGTLISLVAGVLYLRARGKPTG
FGFSAFQAEDDAGDDFSPWQEVNSPTLVSVPNPVFGNHDAFCEPFDDSLLEDDFPDTQRI
LAVK
NT seq
7755 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccccggggtctcctcttgctctgtgtcctggtctcctgcctggcaaactcc
agcttcatcaggggccagaaggtgcagttcaaacgctgtgacatcaagaccacgttggtc
aagcacacaccctgcaccacatgtgctgccatcaagaagcaggtgtgtccctcaggctgg
cggcgtttcccggagaagatctctcaggactgcagctacgagataaagctaggggacact
gtgatgtctaagagcggctgcaacctggaatgctggaaagaagtggtgcagaaagcctgc
tgccctggttactgggggtcccagtgctatgagtgccctgggggagctgagacaccatgc
aatggccacgggacctgcctggatggcatggccaggaatgggacctgcgcgtgtcaggaa
aacttcagtggctcagcctgccaggagtgccgagatccccaccggtttgggccagactgc
caatcagtgtgcagctgtgtgcacggcgtgtgcaaaagtgggccgctgggggatgggagc
tgcctgtgctttgctggatacaccggcccccgctgtgaccaagagctacatgtctgccaa
gccctgagctgcccccagcatacccaatgctctgcagaggaccccacctgcaagtgcctg
cccggctacacccagcaaggcagtgtatgcctagctcccaacccctgccagccatcaccc
tgttccccgctggcccgatgctcagtaagtcccaacgggaaggctcagtgtcactgccct
gagaactaccatggcgacgggaaggtgtgtctgccccaggacccttgcaccattgacttt
ggtggctgccccagcaactctactttgtgtctgtatcagagtccaggcaaggccacctgc
tcatgtcaaccaggcctgatcagcatcaacaacaatgcctctatgggctgctttgctgtc
tgctactcctactcctgtgacctgtcagccacctgccagttgacccctgaagggaagacc
agatgtgtgtgcaaggaagatgaggtgggggacgggcgtgcctgctatggacacttgctc
tccgaggtgcagaaggccaggcagacgggcctgatggtcatgcagctaagagttgccatc
agcatgtttgagcaaggctgccaagagatccttacctcgtcaggacccttcactgtgctc
gtgccatccatcatcttctccagattcttcaccaccaagaccatgatcccattgctggcc
cagaagctctgcagacagtacattatccctgggcagcacatgctacaggacttgggtctc
cagagcacacacacgtggtggacactggccgggaaggagataactgttactaacaaccgc
ttgagatacagctacgtatacaaagaccagccccagaagacgttcaacatccaaaaggcc
aactacatagcagccaacggtatcttccatgtagtcagttacctgaggtgggagctccca
tctgagacctccagggaccccaagaatcctcatgaagattcctcccagcagaaaaccatt
ggccagatcctggcctccactgaggccttcagccggtttgaaatcatcctggagaactgt
gggctgccctccatcctggatgggcccgggcccttcacagtcttcgttccaagcaacgag
gcggtggacagcctgcgcgatggccgtctcatctacctcttcacggcaggtctctccaaa
ctgcaggagctggtgaagtaccacatctataaccacggccagttgacagtagaaaaactc
atctccaaggggcgggtcctcaccatggcaaaccaggtcctgaatgtgaatatctctgag
gaggggcgcatcctgctgggacctaagggagtccctctgcggagagtggatgtgctggct
tccaatggcgtgatccacgtgctggagggcatcctgttgcccccaaccatcctgcccatt
ctgcccaagcactgtggtgaggaccagtacaatatcgtggcgggctcctgtgtggactgc
caagccctgaacaccagcacgtgtccccccaacagtgtgaagctggacatcttccccaag
gagtgtatctacatccacgaccctatggggctcaatgtgctcaagaagggctgtgcccgg
tactgcaaccagactgtcacgaaacttggctgctgcaaagggttttttgggcctgactgc
actcagtgtcctggaggcttctccaacccctgctatggcaaaggcaattgcagtgacggg
atccagggcaacggggcctgcctctgtttccccgactacaagggcctcgcctgccacatc
tgctctaacccaaacaagcatggagaccagtgccaggaagactgtggctgtgttcatggt
ctttgtgacaatcgtccaggcagtgggggtgtgtgccagcatggcacatgtgccccgggc
ttcagaggtcgcttctgcaatgagtcggtggaggactgtgggcccacggggctggccaag
cactgccacctgaatgcccgctgtgttagccaggagggtgtggcccggtgtgtctgtctt
gatggcttcgagggggacggctactcctgcacgcgcagccacccctgctcccgccctgac
cgtggtggctgctcagagaatgctgagtgtgtgcctggtgacaagggcacccaccattgc
acatgccacaggggctggagtggggacggccgtgtctgtgtagccattgatgagtgtggg
ctggacactcgaggtggctgccatgctgatgccctctgcagctacgtgggccctgggcag
agccgatgcacctgcaagctgggcttcgccggggacggctatgagtgcagccccatcgac
ccctgtcgggcaggcaacggtggctgtcatggcctggccacctgccaggcagtgggggga
gggcagaggatctgcaaatgcccccctgggtttggaggtgatggtcttagttgctacgga
gacatcatccgggaactccaggccaatgcccacttctccgccttctcccagtggttccag
aatgccagcatcactcttcctgccaatggccaagtcacagccctggtgccctctgagtct
gccatccgtaggctgaaccctgaggaccgggccttctggctgcagccgaagatgctacca
cacctagtcagggcccattttctccagggtgctctctctgaggaggagctagcccaactg
gacagacaaaatgtgaccaccttggaccccaccacacgctgggagattcgcaacatcagt
gggagggtctgggtgcagaacgccagcgtggatgtagctgacctcctcgccaccaatggt
gtcctacacatcctcagccaggtcttgttgccttcccgagctgatgtgcaaggtgggcag
gggttgctccagcagctggacctggtacctgccttccgtctctttcgggagcttctgcag
cgccatggcttggtgccccagatcgaggctgccactgcttacaccatctttgtgcccaca
aacagctccctggaggcccagagcaatggcagcagcttgaatgcagacacagtgcgacac
catgtgatcctgggggaggcactctctgtggaagccctgcggaaggggggacaccgcaac
tccctcctgggctccgcccactggctcgtcttctacaaccacagtggccagcctgaggtg
aaccacgtgccactggaaggccctttgctggaggcccctggcagctcgctgtttggtctg
tctggcatcctgacagtgggctcaagccgctgtctacacagccatgcagaggccctgagg
gagaaatgcataaactgtaccgggaagttccgctgtactcggggcttccagctgcaggac
acacccaggaagagctgtgtctacagatcaggcttctccttctcccggggctgttcttac
acatgtgtcaagaagattcaggtgcccgactgctgccccggcttctttgggatactatgc
gagccatgcccagggggtctgggtggtgtgtgctcaggccacgggcagtgccaggacagg
ctcctgggcagtggggagtgccgctgtcacgagggcttccacggaaccgcctgcgagatg
tgcgagctgggccgctatgggccctcctgcgctggagtgtgtgactgtgcccacgggatg
tgccaggaggggctgcaaggagatggaagctgtgtctgtaacgtgggctggcaaggcctc
cgctgcgaccagaaaatcgttgaccctcagtgccccaagaagtgcgatcccaatgccaac
tgcatacagaactccactggacccccgacctgcgtctgcgctgcgggctactcgggcaat
ggcagctattgctcagaggtggacccctgtgccaatggccatgggggctgctccccccat
gccaactgcaccaaggtggcacctgggcagcggacgtgcacctgccaggatggctacaca
ggcgacggggagctgtgtcaggaaattaacagctgtcttatccgaaatgggggctgtcac
attcatgccgaatgcatccccacaggtccccagcaggtctcctgcagctgtcatgagggt
tacagtggagatggcatccggacctgtgatcttctggacccctgctcccagaacaatgga
ggctgcagcccttatgccacatgcaaaagcacaggcgatggccagaggacatgcacctgt
aacagaatccaaactgtgggagatggcttcacctgccgtgcccgcctcagcctggagctc
tttcgggacaagcatgcctcgttcttcagccgccatctcctggaatacacggagctcaag
ggaaacgggcctttcacagtcttcgttccacaagcagatctaatgaccaacctgtcgcaa
aatgagctggctcggattcgggcaaatcgccagcttgtgttccgctaccacgtggttggc
tgccagcagcttcacacccaggagctgctggaccagggctacgccacagcactctctggg
cacaccctgcgcttcagcgagagggagggcagcatatacctcaacgacttcgcacgtgta
gtaagcagcgaccacgaagcagtgaacggcatcctgcacttcatcgaccgcgtgctgctt
ccgccagaagtactacactgggagcctgatgccaccccaatcccgagccctccgagaaat
gtcaccgacgctgctgagagctttggttacaagatattcagccaccttgtgacggtggcc
ggcctcctgcccatgcttcgagatgtgtcccacaggcccctcacaatgctgtggcccaca
gattctgccctgcaagccctgcctcctgatcggcaggcctggttataccatgaggaccac
cgtgataagttggcagctattctgcggggccatgtgatccgcaatgttgaggccttggca
tctgacatgcccaaccttggttcactccgaaccatgcatgggacccccatctccttctcc
tgcagtcgtgctaggcctggtgagctcatggtgggtgaggatgatgcccgcattgtgcag
cggtatatgccctttgaaggtggcctggcctatggcattgaccagctactagagccacct
ggtcttggtgcccgctgtgatcgctttgaaacccggccattacgactgaagacttgcagc
atctgtggcctggagccaccctgtcctgagggctcgtgggagcagggcagccctgagacc
tgctggcgctactacgcaaaattatggtcgagcccttccctgcattccctggcacttggc
aacatctgggtgcggcccagcttctggagccatccccaaggcaagagcaggggctgccac
cgcaactgtgtcaccaccacatgggtacccagctgctgccctggtcactatggcagcgag
tgccaagcttgtcccggcagccccagaagcccctgtaatggtcatggcgtgtgcctagat
ggcatgagtggcagtggacggtgtagatgccattcaggttttacagggacagcctgtgaa
ctgtgcacctcaggtttctttggaccccaatgccaagcctgcagctgcacctcccatggc
cgctgtgacgagggcctggggggctctggctcctgcttctgtgatgaaggctggactggg
ccacgctgtgaggtgcagctggagctgcagcctgtgtgtactccaccctgtgcaccccag
gccatgtgccgtgcgggcaacagctgtgagtgcagtctaggctatgaaggcgacggccgt
gtgtgcacagtggcagacctgtgccaggatgggcgtggtggctgcagtgaacatgccaac
tgcagccaggtgggcacagtggtcacctgtgtctgcctgcccgactatgagggtgatggt
tggagctgtcgggcccgcaatccctgtgcagatggccaccatggaggctgcagtgagcat
gccgactgtctcaacactggcccaaacacacgtcgctgtgagtgccatgcaggctatgtg
ggcgatggactgcagtgtctagaggaagctgcaccgcctgtggaccgctgtttgggtcac
ccatcaccctgccacacggatgctgtgtgcactgacctacattttcaggaaaagcgggca
ggtgtcttccacctccaggccaccagcggcccttatggcctgaacttctcagaggctgag
gcagcctgtgcggaccagggagctgtccttgcttctgtctctcaactctctgctgcccag
cagttgggcttccacctgtgtcttatgggctggctggccaatggctctgctgcccaccct
gtcgtcttccctgctgccgactgtggtgatggtcgggtgggtgtagtcagcctgggcgtc
cgcaagaacctctcagagccctgggatgcctactgctaccgcgagcaagatgtggcttgc
caatgtaaggccggctttgtaggtgatgggattagcatatgcaatgggaagctgcttgat
gtcctggctgccactgccaacttctccaccttctacgggatgctgctgggctatgccaat
gccacccagaagggttttgacttcctgcgcttcctggatgatgagctcacctataagaca
ctcttcgtccctgtcaacgaaggttttgtggacaacatgacactgagtggtccagacctg
gagctgcacgcttccaatgccaccttcctgagcaccaatgccagccaggggaccctgctt
cctgcccactcgggcgtcagcctcgtcattagtgacacaggccctggcaacaattcttgg
gcccctgtggccccaggggcagttttggttggccgtgtcatcatatgggacatcatggcc
ttcaacggcatcatccatgctctggccagcccccttctagcaccccctcagcctggagca
gtgctagcacccgaggccccacaggtggcagcaggtgtcggggcagtggttgctgctgga
acactgatcagcctggtggccggcgtgctctacctccgtgctcggggcaagcccacaggc
tttggcttctctgctttccaggcggaagatgatgctggtgacgacttctccccatggcaa
gaagtgaacagccccaccctggtgtctgtccccaaccctgtgtttggcaatcatgatgcc
ttttgtgagccctttgatgactcactcctggaggatgacttccccgatacccagaggatc
ctggcagtcaagtga
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integrated database retrieval system
