Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101975277
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Entry
101975277 CDS
T10664
Symbol
Lamb1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04151
PI3K-Akt signaling pathway
iti04510
Focal adhesion
iti04512
ECM-receptor interaction
iti05145
Toxoplasmosis
iti05146
Amoebiasis
iti05165
Human papillomavirus infection
iti05200
Pathways in cancer
iti05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101975277 (Lamb1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101975277 (Lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101975277 (Lamb1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101975277 (Lamb1)
09162 Cancer: specific types
05222 Small cell lung cancer
101975277 (Lamb1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101975277 (Lamb1)
09174 Infectious disease: parasitic
05146 Amoebiasis
101975277 (Lamb1)
05145 Toxoplasmosis
101975277 (Lamb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
CorA
F5_F8_type_C
ATG17_like
Motif
Other DBs
NCBI-GeneID:
101975277
NCBI-ProteinID:
XP_005319496
UniProt:
I3M9V5
LinkDB
All DBs
Position
Unknown
AA seq
1785 aa
AA seq
DB search
MGLLQVFAFSFLALCGTRVRTQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHK
PEPYCIVSHLQEDKKCFICDSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVEN
VTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGISTG
PMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVKL
HTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGFSEDVEGMVHGHCMC
RHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGG
VCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNLCEKCTCDPAGSQNGGICDSYTDFSAG
LIAGQCRCKLHVEGEHCDICKEGFYDLSAEDPFGCKSCACNPLGTIPGGNPCDSETGYCY
CKRLVTGQHCDQCLPQHWGLSNDLDGCRPCDCDFGGAFNNSCSAESGQCSCRPHMIGRQC
DGVESGYYFTTLDHYLYEAEEASLGPGVSVVERQYIPDRIPSWTGAGFVRVPEGAYLEFF
IDNIPYSMEYDILIRYEPQLPDHWEKAVITVQRPGKIPTSSRCGNTVPDDDNQVVSLSPG
SRYVVLPRPVCFEKGMNYTVRLELPQYTSSDTDVESPYTLIDSLVLMPYCKSLDIFTTGG
SGDGVTNSVWDTFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQMGLACECDPQGSL
SSVCDPSGGQCQCRPNVVGRTCDRCAPGTFGFGPSGCKPCDCHPQGSVNAFCDAITGQCH
CFHGVYARQCDQCLPGYWGFPSCQPCQCNGHADDCDSVTGECLGCQDYTTGHNCERCLAG
YYGDPIIGSGDHCRPCPCPDGPGSGRQFARSCYQDPVTLQLACVCDPGYIGSRCEDCASG
YFGNPSNVGGSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQFCRFGYYGDAL
RQDCRKCVCNYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGC
DPCDCNSAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIET
PQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPDCTPCHQCFALWDVIISELTNRTHKFL
EKAKALKISGVIGPYRETVDSVEKKINEIKDILAQSPAAEPLKNIGNLFEEAEKLTKDVT
EKMAQVEVKLSNTASQSNSTAKELDSLQAEAESLDNTVKELAEQLEFIKNSDIRGALDSI
TKYFQTSLDAEERVNASTTDPNSTVEQSALTRDKVEDLMLERESQFREKQEEQARLLDEL
AGKLQSLDLSAAAEMTCGTPPGADCSETECGGPNCRTDEGQKKCGGPGCGGLVTVAHSAW
QKAMDFDRDVLNALAEVEQLSKMVSEAKLRADEAKQNAQDVLLKTNATKEKVDKSNEDLR
NLIKQIRNFLTEDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL
QQSAADIARAEMLLEEAKRASKSATDVKITADMVKEALEEAEKAQIAAEKAIKQADEDIQ
GTQNLLTSIESETAASEETLSNASQRLNELEKNVVELKRKAAHNSEEAEYIEKVVYTVKQ
SAEDVKKTLDSELDEKYKKVENLIAKKSEESADARRKAEMLQNEAKTLLAQANSKLQLLK
DLERKYEDNQKYLEDKAQELVRLEGEVRSLLKDISQKVAVYSTCL
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atggggctgctccaggtgttcgccttcagtttcttagccttgtgcggaacccgagtgcgc
actcaagaaccggagttcagctatggttgcgctgaaggcagctgttaccccgccaccggt
gaccttctcataggccgagctcagaagctctcagtgacctccacgtgcggactgcacaaa
ccggaaccctactgtattgtcagccacctacaggaggacaaaaaatgctttatatgtgat
tcccaagatccttatcatgagaccctcaatcctgacagccatctcattgaaaatgtggtc
actacatttgctccaaaccgcctcaagatttggtggcaatccgaaaatggtgtggaaaat
gtaactatccaactggatttggaagcagaattccattttactcatctcataatgactttc
aagacattccgtccggctgctatgctgatagagcgatcgtctgactttggtaaaacatgg
ggcgtgtacagatacttcgcctatgactgtgagagctcgttcccaggcatctcaactggt
cccatgaaaaaagtcgatgatataatttgtgattcccgatattctgacattgaaccctcg
acagaaggagaggtgatatttcgtgctttagatcctgcattcaaaatagaagatccttat
agcccgaggatacagaatctattaaaaatcaccaacttgagaatcaagtttgtgaaactg
catactttgggagataaccttttggattccagaatggaaattagggaaaagtactactat
gcagtttatgatatggtggtccgaggaaattgcttctgctacggccacgccagtgaatgt
gcccctgtggatggattcagtgaggacgtggaaggaatggtccatggacactgcatgtgc
aggcataatacaaagggcttaaactgtgaactgtgcatggatttctaccatgatttgccc
tggagacctgccgaaggtcggaacagcaatgcctgtaaaaagtgtaactgcaacgaacat
tccagctcatgccactttgacatggccgtgttcctggccactgggaatgtcagcggagga
gtgtgtgatgattgtcagcacaacaccatgggacggaactgtgagcagtgcaaaccgttt
tactaccagcacccggagagggatatccgagatcctaatctctgcgaaaaatgtacatgt
gacccagcaggttctcagaatgggggaatctgtgacagttacactgatttttctgctggt
ctcattgctggtcagtgtcggtgtaaattgcacgtggaaggagaacattgtgatatttgc
aaagaaggcttctatgacttaagtgctgaagatccatttggttgtaaatcttgtgcttgc
aaccctctgggaacgattcctggcggaaatccttgtgattctgagactggttactgctac
tgtaagcgtctggtgacaggacagcattgtgaccagtgtctgccacagcattggggcttg
agcaacgatctggacggctgtcgaccttgtgactgtgacttcgggggagcattcaacaac
agttgctctgcggagtcgggccagtgctcctgtcgaccccacatgatcggaaggcagtgt
gacggggtggaatctgggtactactttaccaccttggatcactacctctatgaagcagag
gaagccagtttggggcctggagtcagtgtggtggaacggcagtacatcccagaccggatt
ccatcctggactggagcgggctttgtccgagtgcccgagggggcttatttggagttcttc
attgacaacataccatattccatggagtatgacatactaattcgctatgagccacagctt
cccgatcactgggaaaaagctgtcatcacagtgcagcgacctgggaagattccaaccagc
agccgatgtggtaacactgttcctgatgatgacaaccaggtggtgtcattatcaccaggc
tcaagatacgttgtccttccccgccctgtgtgctttgagaagggtatgaactacacggtg
aggctggagctgccccagtacacttcttccgatactgacgtggagagcccctacacactc
attgactcacttgttctcatgccttattgtaaatcgctggacattttcaccacgggaggc
tcaggagatggggtcaccaacagtgtctgggacacctttcagagataccggtgtctggag
aacagcagaagtgttgtgaagacaccaatgactgatgtctgcagaaacatcatctttagc
atttccgccctgttacatcaaatgggcctggcttgcgaatgtgaccctcagggctccttg
agttctgtgtgtgaccccagcggaggccagtgccagtgtcggccaaacgtggttggaaga
acctgtgacaggtgtgcacctggaacctttggctttggccccagcggatgcaaaccttgt
gactgccaccctcaaggatccgtcaatgccttctgcgatgcgatcactggccagtgccac
tgtttccacggggtgtatgctcggcagtgtgaccagtgtttacctgggtactggggcttt
ccaagttgccagccctgccagtgcaacgggcatgccgatgactgtgactcagtgaccggg
gagtgcttgggctgccaggactacaccacaggccacaactgtgagaggtgcttggctggt
tactatggtgaccccatcattgggtcaggagatcactgccgcccttgcccttgcccagat
ggtcctggcagtggacgccagtttgccaggagctgttaccaagatcctgtgactctacag
cttgcctgtgtttgtgatcctgggtacattggctccagatgtgaggactgtgcctcagga
tactttggcaatccctccaatgttggggggtcctgtcagccttgccagtgtcaccacaac
attgacacaacagacccagaagcttgtgacaaggagactggaaggtgtctcaagtgcctg
taccacacggaaggggaccattgccagttctgccgatttgggtactatggtgatgccctc
cggcaggactgtagaaagtgtgtctgcaattacctgggcaccgtgcaggagcactgtaat
gggtctgactgtcagtgtgacaaagccactggtcagtgcttgtgtcttcctaatgtgatc
gggcagaactgtgaccgctgtgcgcccaatacctggcagctggccagtgggactgggtgt
gacccatgtgactgtaattctgcacattccttcggaccatcttgtaatgagttcacaggg
cagtgccagtgcatgccgggatttggaggccgtacctgcagcgagtgtcaggagctcttc
tggggagatcccgacgtggaatgccgagcctgtgactgtgaccccaggggcattgagaca
ccacagtgtgaccagtccacaggccagtgtgtgtgtgtggagggtgtcgagggtccacgc
tgtgacaagtgtacacgagggtactcaggagtcttccccgactgcacaccctgccaccag
tgctttgctctctgggacgtgatcatctctgagctgaccaacaggacccacaagttcctg
gagaaagccaaagccttgaagatcagcggtgtaattggaccttacagggagactgtggac
tcagtggagaagaaaatcaacgagataaaagacatcctggcccagagcccagcagcagag
ccactgaaaaacatcgggaatctctttgaggaagcagagaaactaaccaaagatgttaca
gaaaagatggctcaagtagaagtaaaattatctaacacagcttcacaaagcaacagcaca
gccaaagaactggattccctacaggcagaagccgagagcctcgacaatactgtgaaagaa
cttgctgaacaactggaatttatcaaaaactcagatattaggggtgccttggatagtatt
accaagtatttccagacctctcttgatgcagaagagagggtgaatgcctccaccacagat
cccaatagcactgtggaacagtctgctctcacccgggacaaagtagaagacctgatgctg
gagagagaatcccagttcagggaaaaacaagaagaacaggctcgacttctggatgaactg
gcaggcaaactacaaagtctagacctttcagctgctgctgaaatgacatgtgggacacct
ccaggggctgattgttctgagactgaatgtggtggccccaactgcagaactgatgaagga
cagaagaagtgtggggggcctggctgtggtggtctggtcactgttgcccacagtgcctgg
cagaaagctatggactttgaccgagatgtcctgaatgccctggctgaagtggaacaactc
tccaaaatggtctctgaagcaaaactgagggcagatgaggcaaaacagaatgctcaggat
gttctgttgaaaacaaatgctaccaaagaaaaagtagacaagagcaatgaggatctgaga
aatctgatcaagcaaatcagaaactttttgactgaggatagtgctgatttggacagcatt
gaagctgttgctaatgaagtactgaaaatggaaatgcctagcaccccacagcagttacag
aacttgacagaagacatccgtgaacgagttgaaagcctttctcaagtagaggttattcta
cagcagagtgctgctgacattgccagagctgaaatgttgttagaagaagctaagagagcc
agcaaaagtgcaacagatgttaaaatcacagcagatatggtaaaggaagctctggaggaa
gcagaaaaggcccaaattgcagcagagaaggcaattaaacaagcagatgaagatatccaa
ggaacccagaacctgttaacttcaatcgaatctgaaacagcagcttccgaggaaacactg
tccaatgcctcccagcgcctcaatgaactagaaaagaacgtggtagaacttaaacggaag
gctgcccataactctgaggaggcagaatacattgaaaaagtagtatatactgtaaaacaa
agtgcagaagatgttaagaagactctggacagtgaacttgatgaaaagtataagaaagta
gaaaatttaattgccaaaaaatctgaagagtcggctgatgccagaaggaaagctgaaatg
ctacaaaatgaagcaaaaacacttctggctcaagcaaacagcaaactgcaactactcaaa
gacttagaaagaaaatatgaggacaatcaaaaatacttagaagataaagctcaagaatta
gtgagactggaaggagaggtccgttcactccttaaggatataagccagaaagttgctgtt
tatagcacctgcttgtaa
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integrated database retrieval system
