Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101975325
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Entry
101975325 CDS
T10664
Symbol
Rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X2
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101975325 (Rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101975325 (Rabgef1)
Membrane trafficking [BR:
iti04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101975325 (Rabgef1)
Protein recycling
Other Rab GTPase associated proteins
101975325 (Rabgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
101975325
NCBI-ProteinID:
XP_005328603
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHRARQKQIQEDWELAER
LQREEEEAFASSQSSQGAPSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGSKKAEIQE
AKAPSPSINRQTSIETDRVSKEFIEFLKTFHKTGQEIYKQTKVFLEGMHYKRDLSIEEQS
ECTQDFYQNVAERMQTRGKVPPERVEKIMDQIEKYIMTRLYKHVFCPETTDDEKKDLAIQ
KRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIF
NAIKVTKREPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL
CCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQEPEGWSPDACLGVKQMYKNLDLLSQ
LNERQERIMNEAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIKPQSQPLAAIDSENVENDK
LPPPLQPQVYAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcaagtcggagcgccgaggaattcatgtggaccagtcggaactcctgtgcaag
aagggatgtggctattacggcaaccctgcctggcagggcttctgctccaagtgctggagg
gaggagtaccaccgagcccggcagaagcagatccaggaggattgggagctggctgaacga
ctccagcgggaggaggaagaggcctttgccagcagtcagagcagccagggggccccgtcc
ctcacgttttccaaatttgaagagaagaagaccaatgagaagacccgcaaggttaccaca
gtgaagaaattcttcagtgcttcttccagagttggatcaaaaaaggcagaaattcaggaa
gcaaaagctcccagtccttccataaaccggcagaccagcattgaaacagaccgagtgtct
aaggagttcatcgagtttctcaagaccttccacaagactggacaagagatctataaacag
accaaggtgttcttggaaggaatgcattacaaaagggatctgagcattgaggagcagtca
gagtgtactcaggatttttaccagaatgtggcagaaagaatgcagacccgtggaaaagtg
cctccagaaagagttgagaagataatggatcagattgaaaagtacatcatgacgcgcctc
tataaacacgtgttctgcccagaaaccacagacgatgagaagaaggacctcgccattcag
aagaggatcagagccctgcactgggttacacctcagatgctttgtgtccctgtcaatgaa
gaaattccagaagtgtctgacatggtggtgaaagcgatcacagacatcattgaaatggat
tcgaagcgtgtgcctcgggataagttggcctgcatcaccaggtgcagcaagcacatcttc
aacgccatcaaggtcaccaagagggagcctgcttctgcagatgacttcttgcccacgctc
atctacatcgtgctgaagggtaaccccccacgcctgcagtccaacatccagtacatcacc
cgcttctgcaaccctagtcggctgatgaccggggaggatggctactatttcaccaacctg
tgctgtgctgtggctttcattgagaaattagatgcccagtctttgaatctgagtcaggag
gattttgatcgctacatgtccggccagacctctcccaggaagcaagagcccgagggctgg
tctcctgatgcctgcttaggtgtgaagcagatgtataagaacttggatcttctgtctcag
ttgaatgaaagacaggaaagaatcatgaatgaagccaagaaacttgaaaaagacttaata
gattggacagatggaattgcaaaagaagttcaagacattgtggagaaatatccactggaa
attaagccccaaagtcaaccattagcagctattgactctgaaaatgttgaaaatgacaaa
ctccccccaccattgcagcctcaggtttatgctggatga
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integrated database retrieval system
