Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101975362
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Entry
101975362 CDS
T10664
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03040
Spliceosome
iti05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101975362
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101975362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101975362
03041 Spliceosome [BR:
iti03041
]
101975362
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101975362
mRNA cycle factors
Common to processing body (P body) and stress granule
101975362
Spliceosome [BR:
iti03041
]
Common components
Common spliceosomal components
hnRNP proteins
101975362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
101975362
NCBI-ProteinID:
XP_040130090
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MTTEIDFIPFQKWSASNLYTHSDFCNTNNIALYEFTYLITCSLILCRISHDPKEREQLRK
LFIGGLSFETTDDSLREQFEKWDTLTDCVAMRDPQTKRSRGFGFVICVEEVNATMCAHKV
DGCVVEPKRAVSREDSVKPGAHLPVKKIFVCGIKEDIEEYNLRDYFEKYGKIVVVVPVKK
EKIEVMEYRQSGKKRGFAFVTFDDHDIVDKIVVQKYHTIDGHNCEMKKALFTQEMQFAGS
QRGRGGGSGNFMGCGGNFGGGGGNFGHGGNFGGRGGYGDGGGGSRDSYGGGDGGXNGFGG
DGGNYGGGPGYSSRGGYDGGGYGNQGVRYGGGGGYDDYNEGGNFGGGNYGGRNYNDFGNY
SGQQQSNYGPMKRGSFGGRSSGSPYGGGYGSGGGSGGYGSRRF
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgactactgaaatagacttcatacctttccagaaatggtctgcttctaatttatacacc
cattctgatttctgcaacacaaataatattgctttgtacgagtttacttacctgataacc
tgtagcctaatcctttgccgtatctcccatgatccaaaggaacgagagcaattgaggaag
ctgtttattggtggtctgagctttgaaactacagatgatagtttaagagaacagtttgag
aaatgggacacactcacagattgtgtggcaatgagagacccccaaacaaaacgttccagg
ggctttggttttgtgatttgtgttgaagaggtgaatgcaacaatgtgtgctcacaaggtt
gatgggtgtgtagtggaaccaaagagagctgtttctagagaggattctgtaaagcctggt
gcccatctaccagtgaagaaaatttttgtttgtggtattaaagaagatatagaagaatat
aatttgagagattactttgaaaagtatggcaagattgtggtagtggtaccagtaaaaaaa
gaaaaaatagaagttatggaatacaggcagagtggtaaaaagagaggatttgcttttgta
acttttgatgatcatgatatagttgacaaaattgttgttcagaaataccacactattgat
gggcataattgtgaaatgaaaaaggccctttttacacaagagatgcagtttgctggatca
caaagaggtcgtggaggtggatctggcaactttatgggttgtggaggaaactttggaggt
ggtggaggtaactttggccatggtggaaactttggtggaagaggaggctatggtgatgga
ggtggtggcagcagagatagttatgggggaggtgatggtggataaaatggatttggaggt
gatggtggcaactatggtggtggtcctggttatagtagtagaggaggttatgatggtggt
ggatatggaaaccaaggtgttagatatggtggtggaggaggatatgatgattacaatgaa
ggaggaaattttggtggtggtaactatggtggtaggaactataatgattttggaaattac
agtggtcaacagcaatcaaattatggacccatgaagcggggcagttttggtggaagaagc
tctggcagtccctatggtggtggttatggatctggtggtggaagtggtggatatggtagc
agaaggttttaa
DBGET
integrated database retrieval system