KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101975362
Entry
101975362         CDS       T10664                                 
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03040  Spliceosome
iti05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101975362
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    101975362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:iti03019]
    101975362
   03041 Spliceosome [BR:iti03041]
    101975362
Messenger RNA biogenesis [BR:iti03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     101975362
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101975362
Spliceosome [BR:iti03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    101975362
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3
Other DBs
NCBI-GeneID: 101975362
NCBI-ProteinID: XP_040130090
LinkDB
Position
Unknown
AA seq 403 aa
MTTEIDFIPFQKWSASNLYTHSDFCNTNNIALYEFTYLITCSLILCRISHDPKEREQLRK
LFIGGLSFETTDDSLREQFEKWDTLTDCVAMRDPQTKRSRGFGFVICVEEVNATMCAHKV
DGCVVEPKRAVSREDSVKPGAHLPVKKIFVCGIKEDIEEYNLRDYFEKYGKIVVVVPVKK
EKIEVMEYRQSGKKRGFAFVTFDDHDIVDKIVVQKYHTIDGHNCEMKKALFTQEMQFAGS
QRGRGGGSGNFMGCGGNFGGGGGNFGHGGNFGGRGGYGDGGGGSRDSYGGGDGGXNGFGG
DGGNYGGGPGYSSRGGYDGGGYGNQGVRYGGGGGYDDYNEGGNFGGGNYGGRNYNDFGNY
SGQQQSNYGPMKRGSFGGRSSGSPYGGGYGSGGGSGGYGSRRF
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgactactgaaatagacttcatacctttccagaaatggtctgcttctaatttatacacc
cattctgatttctgcaacacaaataatattgctttgtacgagtttacttacctgataacc
tgtagcctaatcctttgccgtatctcccatgatccaaaggaacgagagcaattgaggaag
ctgtttattggtggtctgagctttgaaactacagatgatagtttaagagaacagtttgag
aaatgggacacactcacagattgtgtggcaatgagagacccccaaacaaaacgttccagg
ggctttggttttgtgatttgtgttgaagaggtgaatgcaacaatgtgtgctcacaaggtt
gatgggtgtgtagtggaaccaaagagagctgtttctagagaggattctgtaaagcctggt
gcccatctaccagtgaagaaaatttttgtttgtggtattaaagaagatatagaagaatat
aatttgagagattactttgaaaagtatggcaagattgtggtagtggtaccagtaaaaaaa
gaaaaaatagaagttatggaatacaggcagagtggtaaaaagagaggatttgcttttgta
acttttgatgatcatgatatagttgacaaaattgttgttcagaaataccacactattgat
gggcataattgtgaaatgaaaaaggccctttttacacaagagatgcagtttgctggatca
caaagaggtcgtggaggtggatctggcaactttatgggttgtggaggaaactttggaggt
ggtggaggtaactttggccatggtggaaactttggtggaagaggaggctatggtgatgga
ggtggtggcagcagagatagttatgggggaggtgatggtggataaaatggatttggaggt
gatggtggcaactatggtggtggtcctggttatagtagtagaggaggttatgatggtggt
ggatatggaaaccaaggtgttagatatggtggtggaggaggatatgatgattacaatgaa
ggaggaaattttggtggtggtaactatggtggtaggaactataatgattttggaaattac
agtggtcaacagcaatcaaattatggacccatgaagcggggcagttttggtggaagaagc
tctggcagtccctatggtggtggttatggatctggtggtggaagtggtggatatggtagc
agaaggttttaa

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