Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101975569
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Entry
101975569 CDS
T10664
Symbol
Smc3
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04110
Cell cycle
iti04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101975569 (Smc3)
04114 Oocyte meiosis
101975569 (Smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
iti03036
]
101975569 (Smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
iti00535
]
101975569 (Smc3)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
101975569 (Smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
101975569 (Smc3)
Proteoglycans [BR:
iti00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101975569 (Smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_29
DUF3899
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
101975569
NCBI-ProteinID:
XP_040128462
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MAPRPLLSPSEVDQSEWRRKGLHLRREMGRLSSAWASPRGAHLGGTVSKSFDVIVGRNGS
GKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEV
SLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRL
KLLREVAGTRVYDERKEESISLMKETGKINVILLYLFLLQIILSLCCYIGSGDFFAFFQL
SAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQR
TKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGI
ARFGNFXQHLILYLVSVXNIHCYGLRGDXHSNXEQKLTVFLKVIIANVKQLLWVNDLLSX
CHLWIITMKLNFKFELFLFPXKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWR
EENAEQQALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHG
IVMNNFECEPAFYTCVEVTAGNSLSLNKIVIQNHYLYHVLFIGDQVSHRGALTGGYYDTR
KSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQRSLQSLEASLHAMES
TRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYL
NENLRKRLDQVEQVICSFLRILSQILFPILDLDNSIDKTEAGIKELQKSMERWKNMEKEH
MDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQ
CNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQL
TFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVD
QFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA
QHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEMAKDFVE
DDTTHG
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggccccgcggcctcttctctctccctctgaggtggaccagagcgagtggaggaggaag
ggactccatctccgtcgagaaatggggcgcctctcttcagcctgggcctccccgcggggt
gctcatctgggaggcacggtctccaagagttttgatgttattgtgggcagaaatggatcc
ggaaaaagtaactttttttatgcaattcaatttgttcttagtgatgaatttagtcatctt
cgtccagaacagcggttggctttgttgcatgagggtactggtcctcgggttatttctgct
tttgtggaaattatttttgacaattcggacaaccggttaccaattgataaagaggaagtt
tcacttcgaagagtcattggtgccaaaaaagatcagtatttcttagataagaaaatggtc
acgaaaaatgatgtgatgaacctccttgaaagtgctggtttttctcgaagcaatccttat
tatattgttaaacaaggaaagatcaatcaaatggcaacagcaccagattctcagagacta
aaactattaagagaagtagctggtactagagtatatgatgaacgaaaagaagaaagcatc
tccttaatgaaagaaactggtaaaataaatgtgatactgctttatttatttttgttgcag
attattttgtcattgtgttgttacattggaagtggtgacttttttgcttttttccagctt
tctgctaagcgagaaactagtggagaaaaatcaagacaattacgagatgcccaacaggat
gcaagagataaaatggaggatattgagcgtcaagttagagagttgaaaacaaaaatttca
gctatgaaagaagaaaaagaacagctcagtgctgaaagacaagagcagatcaagcagagg
actaaactggagcttaaagctaaggatttacaagatgaattagctggcaatagtgaacaa
aggaaacgtttattaaaagagaggcagaaattgcttgaaaagatagaagaaaagcagaaa
gaactggcagaaacagaacctaaattcaacagcgtaaaagaaaaagaagagcgaggaatt
gctaggtttggaaatttttagcagcacttaattttgtacctagtttctgtgtaaaatata
cattgctatgggttaagaggggattagcacagtaattaagagcaaaagttaactgttttc
ctgaaagtaataatagctaatgttaaacaactcctttgggtcaatgatctactttcataa
tgtcatctatggattatcactatgaaattgaattttaaatttgaattgtttttatttcca
tagaaactggatcaggatctcaatgaagtcaaagctcgagtagaagaactggacagaaaa
tattatgaagtaaaaaataagaaagatgaattacaaagtgaaagaaattacttgtggaga
gaggaaaatgcagaacagcaagcacttgctgctaaaagagaagatcttgaaaagaagcag
caacttcttagagcagcaacaggaaaggccattttaaatggaatagatagtataaacaaa
gtgttggaccattttcgtcgaaaaggaataaaccaacatgtacaaaatggctatcatggc
attgtgatgaataactttgagtgtgagccggccttttacacatgtgtggaagtcactgct
ggaaacagtttatcattgaataaaattgttatacagaatcactacctttatcatgttttg
tttataggtgaccaagtcagtcatcggggtgctctaactggaggttattatgacacaagg
aagtctcgacttgaattacaaaaagatgttagaaaagcagaagaagaactgggtgagctg
gaagcaaagctcaatgaaaacctgcgcagaaatattgaaaggattaataatgaaattgat
cagttgatgaatcaacgtagcttacaaagtttggaagcaagtttgcatgctatggagtcc
accagagaatcactgaaagcggaactaggaactgatttgctttctcaacttagtctggaa
gatcagaaaagggtagatgcactgaatgatgaaattcgtcaacttcagcaggaaaacaga
caattactaaatgaaagaattaaattagaaggtattattactcgagtagaaacttatctc
aatgaaaatttgaggaaacgcttggaccaagtagaacaggtaatttgttcttttttgagg
attctaagccaaattttgtttcccatcttagatttggacaattccattgataaaacagaa
gctggaattaaggagcttcagaagagtatggagcgttggaaaaatatggaaaaagaacac
atggatgctataaatcatgatactaaagaactggaaaagatgacaaatcgacaaggcatg
ttattgaaaaagaaagaagaatgtatgaagaaaattcgagaacttggatcacttcctcag
gaagcatttgaaaagtatcagacactgagcctcaaacaattatttcgaaaactcgaacag
tgcaacactgagttaaagaagtacagccatgttaacaaaaaagctttagatcagtttgta
aatttttctgagcagaaagaaaagttaataaagcgtcaagaagagttggatagggggtac
aaatcaattatggaactgatgaatgtactcgaacttcgaaaatatgaagctattcagtta
actttcaaacaggtatccaagaacttcagtgaagtattccagaagttagtacctggcggc
aaagctactttggtgatgaagaaaggagatgtggaaggcagtcagtctcaggatgaagga
gaagggagtggtgaaagtgagaggggttctgggtcacaaagcagtgttccatcagttgac
cagttcacaggagttggaattagggtgtcgtttacaggaaaacaaggtgaaatgagggaa
atgcaacagctttcaggtggacagaaatccttagtagcccttgctctgatttttgccatt
cagaaatgtgacccagctcctttttacttgtttgatgaaattgaccaagctctggatgct
caacaccgaaaggctgtgtcagatatgattatggaacttgctgtacatgctcaatttatt
acaactacttttaggcctgaactgcttgagtcagctgacaaattctatggcgtaaagttc
agaaacaaggttagtcatattgatgtgatcacagcagagatggccaaggactttgtagaa
gatgatactacacatggttaa
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