Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101975689
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Entry
101975689 CDS
T10664
Symbol
Skp2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X4
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04068
FoxO signaling pathway
iti04110
Cell cycle
iti04120
Ubiquitin mediated proteolysis
iti04150
mTOR signaling pathway
iti05169
Epstein-Barr virus infection
iti05200
Pathways in cancer
iti05203
Viral carcinogenesis
iti05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101975689 (Skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
101975689 (Skp2)
04150 mTOR signaling pathway
101975689 (Skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101975689 (Skp2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101975689 (Skp2)
05203 Viral carcinogenesis
101975689 (Skp2)
09162 Cancer: specific types
05222 Small cell lung cancer
101975689 (Skp2)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
101975689 (Skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101975689 (Skp2)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101975689 (Skp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
DUF7885
LRR_R13L1-DRL21
WHD_GPIID
Motif
Other DBs
NCBI-GeneID:
101975689
NCBI-ProteinID:
XP_013214218
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MGVSALEKEEVDSENIPQELLSNLGHPQSPTRKRLKSKGSDKDFVIIRRPKLNRENFPGV
SWDSLPDELLLGIFSCLCLPDLLKVSGVCKRWYCLAFDESLWQTLDLTGKNLHPDVIVRL
LSRGVVAFRCPRSFVDQPLVEHCSPFRVQHLDLSNSVINVSTLHGILSQCSKLQNLSLEG
LQLSDPIVNNLAQNSNLVRLNLCGCAGFSESALKTLLSSCSRLDELNLSWCYEFTEKHVQ
VAVAHVSETITQLNLSGYRKNLQKSDVSTLVRRCPNLVHLDLSDSVMLKHDCFPEFLQLN
YLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLREALPHLQINCSYFTT
IARPTVGNKKNQEIWGIRCRLTLQKPSCL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgggggtctccgccctagagaaggaggaggtggacagtgagaacatcccccaggaactg
ctctctaacctgggccaccctcagagccccacacggaaacggctgaaaagcaaagggagt
gacaaagactttgtgatcatccgcaggcctaaactcaatcgagagaacttcccaggtgtt
tcgtgggactccctcccagatgagctgctcctggggatcttctcttgcctctgcctcccc
gatctgctgaaagtctccggcgtttgtaagaggtggtactgcctcgcgtttgatgaatct
ctctggcaaaccctggacctcacaggtaaaaatctgcacccagatgtgattgttcgtctg
ctgtctcgaggcgtggtggccttccgctgcccccgatcatttgtggaccaacccttggtt
gaacattgcagcccttttcgtgtccagcacttggatctgtctaactcagttataaacgta
tctaccctccatggcattctgtctcagtgctccaagttgcagaatctaagcctggaaggc
ctccagctttctgatcccattgtcaataatcttgcgcagaactcaaatttagtacgactc
aacctttgtgggtgtgctggattttctgagtctgccctgaagactctgctaagcagctgt
tccagactggatgagctgaacctctcctggtgctatgagttcactgaaaagcacgtgcag
gtggctgtcgcacatgtgtcagagaccatcacccagttgaatcttagtggctaccgaaag
aatcttcagaaatcagatgtctctaccttagtcagaagatgccccaaccttgtccatctg
gacttaagtgacagtgtcatgctaaagcatgactgctttccagaatttctccagctcaac
tacctccaacacctgtcactcagtcggtgctatgatataattcctgaaactctacttgaa
cttggagaaattcccacactaaaaacactacaagtttttggaattgtgccagatggtacc
cttcaactgttacgggaagcccttcctcatctgcaaattaattgctcctatttcaccacc
attgccaggccaactgtcggaaacaaaaagaaccaggagatatggggcatcaggtgccga
ctgacactgcaaaagcccagctgtctatga
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