Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101975733
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Entry
101975733 CDS
T10664
Symbol
Cfap57
Name
(RefSeq) cilia- and flagella-associated protein 57 isoform X1
KO
K24729
cilia- and flagella-associated protein 57
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
iti03037
]
101975733 (Cfap57)
Cilium and associated proteins [BR:
iti03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
101975733 (Cfap57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_EML
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
WD40_like
ATG16
CC4_CEP85
Beta-prop_WDR75_2nd
YabA
Beta-prop_DCAF12
Beta-prop_SCAP
VPS11_N
Beta-prop_IFT122_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
101975733
NCBI-ProteinID:
XP_013218266
LinkDB
All DBs
Position
Unknown
AA seq
1185 aa
AA seq
DB search
MLALSISPNRRYLAISEIVQEKPVITIYELSSIPCRKRKVLNTFDFPVQKFISMAFSPDS
KYLLTQTSPPESNLVYWLWEKQKVMALIRTDTQNNPVYQVSINPQDNTQVCVTGNGMFKL
LRFAEGTLKQTNFQRGEIQNYLAHAWVAEDKVIVGTDTGKLFLFESGDQRWETNIMVKEP
IDSSKNLEVVHESESLVEFPPVSSPVPSFEQIVTTSNHNQLVMPRVFAIAAYSKGFACSA
GPGRVLLFEKIEEKDFYRESREIRIPVDPQSNDPSQSDKQDILCMCFSPSEETLVASTSK
NQIYSITMSLTEISKGEPAHFEYLMYPLHSASITGLSTCIRKPLIATCSLDRSVRIWNYE
SNTLELFKEYQEEAYTISLHPSGHFVVVGFADKLRLMNLLIDDIRSFKEYSIRGCRECAF
SNGGHLFAAINGNVIHVFTTTSLENITNLKGHTGKIRSIVWNADDSKLISGGTDGAIYEW
NLSSGKRETECVLKSCSYNCVTVSPDGRIIFAVGSDQTLKEIADSSVLREMSAFDVVYTA
IVISHSGRMMFVGTSVGTIRAMKYPLPLQKEFNEYQAHAGPITKMLLTFDDQYLLTTAED
GCLFTWKVFDKDGRGIKREREVGFAEEVLVTKTDMEEKAQIMLELKTRVEELKMENEYQL
RLKDMNYSEKIKELTDKFLQEMESLKTKNQVLRTEKEKQDISHRERIEDLLDKQNRELQD
LECCNNQKLLLEYEKYQELQLKSQRMQEEYEKQLRDNDETKSQALEELTEFYEAKLQEKT
TLLEEAQEDVRQQLREFEETKKQIEEDEDREIQDIKIKYEKKLREEKESNLRLKGETGIM
RKKFSSLQKEIEERTNDIEMLKGEQEKLQAVIRSLEKDIQGLKREIQERDETIQDKEKRI
YDLKKKNQELEKFKFVLDYKIKELKKQIEPRENEIKEMKEQIQEMEAELERFHKQNTQLE
LNITELWQKLRATDQEMRKEKQKERDLEAVVKWFKTDLHNCVAYIQEPPLLKEKVRGLFE
KYVQRADMVEMAGLNTDLQQEYARQREHLERNLATIKKKVLKESELHRTDYVRIMQENVS
LIKEINELRRELKYTRSQVYDLEAALKLSKKIRTQEDQETACGKDAEKKTDQVWKMTGSG
QGTRRLGSEERQESGSHGENWPHTAMGARRLTLAQLLEEPSKGPL
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgttggccttgtccatcagccccaatcggcggtacctcgccatctccgagattgtgcag
gagaaacctgtcatcaccatttatgagctgtcatccatcccgtgccggaagcgcaaagtc
cttaatacttttgactttccagttcagaaatttatcagcatggccttttctccagactcc
aaatatctattgactcagacatcacctccagaatcaaaccttgtctattggctgtgggaa
aagcagaaagtaatggcccttattagaactgacactcagaacaaccctgtctaccaggtg
agcattaatccccaggataacactcaggtttgtgtcactggaaatggaatgtttaagctt
ctgcgttttgctgagggaaccctaaagcaaaccaattttcagagaggagaaatccaaaac
tatctagcccatgcctgggtggctgaagacaaggtcattgttggcactgacacaggaaag
ctttttctctttgaatctggagaccagcgctgggaaaccaacataatggtcaaggagccc
atcgatagctcaaagaacctggaggttgtccacgagtcagagagtctggtcgaatttcca
ccagtcagttccccagtcccttcctttgaacagatcgtgacgaccagtaaccacaaccaa
ctggtcatgccccgggtgttcgccattgctgcctattcaaaagggtttgcctgctctgct
ggacctggaagagttctgctgtttgaaaagatagaagaaaaggacttttaccgagagagc
agggaaatccggattcctgtggacccacagagcaacgacccaagtcagtctgacaaacag
gacattctgtgcatgtgcttcagtccctcggaggaaaccctggttgccagcaccagtaag
aaccaaatctacagcatcaccatgtccctgacagaaatcagcaaaggggagcctgctcat
ttcgagtacctgatgtacccattacactcagcatccatcaccggtctgtctacctgcatc
cgcaaacccctcattgctacctgttcactggatcgatctgttcgcatctggaattatgaa
tcaaacactctggaactttttaaagaatatcaagaagaagcatacacaatcagccttcac
ccatctggacacttcgttgtagtagggtttgctgataaactacgccttatgaatctactc
attgatgatatacgttctttcaaagagtattctatcagaggatgcagagagtgtgccttt
agcaatggaggccacctgtttgctgcaatcaatggaaatgtgattcacgtttttaccacc
acaagcctagagaacatcaccaacctgaaaggacacactgggaagattcgctcaattgtc
tggaacgcagatgacagcaaactgatttctggtggcacagatggtgctatatatgaatgg
aatctgtcttcaggaaagagagagacagagtgtgtgctcaagtcctgcagctacaactgt
gttactgtctcccctgatggcagaattatttttgctgttggatcagaccagacactcaag
gagattgcagattcttcagtcctgcgagagatgtcagcatttgacgtcgtctacacggca
attgtcatctcccattcggggcgcatgatgtttgtgggcacctcagtgggaaccatccgt
gccatgaagtaccccctgcctttgcagaaagaattcaatgagtatcaggctcatgctggt
cctatcaccaagatgttgctcacctttgatgatcagtacctgctgactactgctgaggat
ggctgcctgttcacctggaaggtcttcgataaggatggccgcggaatcaagcgggaaagg
gaggtgggctttgctgaagaggtgctcgtgactaaaacagacatggaagagaaggctcag
attatgttggagctaaagactcgtgtggaagaattaaaaatggagaatgagtatcaactt
cgactaaaggatatgaactactctgagaagattaaggagcttacagacaagttcctccag
gaaatggagtccttgaaaaccaaaaaccaggttttaagaacagaaaaagaaaagcaggat
ataagtcaccgtgagcgcatagaagacctcctagacaaacagaaccgggagctgcaagac
ctggaatgttgcaacaaccaaaagttgcttctagaatatgagaaataccaggagttacaa
ctcaagtcccaaaggatgcaggaagagtatgaaaaacagctccgagataatgatgagacc
aaaagccaagccctggaggaactgactgaattttatgaggccaagctgcaagagaaaacc
acccttctggaagaggcccaggaggatgtcaggcagcagctgcgggaatttgaagagacc
aagaagcagattgaagaagatgaagaccgagaaatccaagatatcaaaatcaagtacgag
aaaaaacttcgggaagagaaggaatccaacctgcggctcaagggagaaacaggcattatg
aggaaaaagttcagcagcctgcagaaggagatcgaagagcgaaccaacgacattgagatg
ctgaagggagagcaggagaagctgcaggcagtcatcaggtccctagagaaagacattcaa
ggcctcaaacgagagatccaggagagagatgagacaattcaagacaaggagaaacgaatt
tatgatctgaaaaagaagaatcaagaactagagaagttcaagtttgtgcttgactacaaa
ataaaagaactgaagaagcaaatagaacctcgagagaatgagatcaaggagatgaaggaa
cagattcaggagatggaagccgagctggagcgttttcataaacagaacacgcaactggaa
ctgaacatcacagagctgtggcagaaactaagagctaccgatcaagagatgcgcaaagag
aaacagaaggagcgggacttggaagcagtggtcaaatggtttaagacagaccttcacaac
tgtgtggcatatatccaggagcccccgctgctgaaggagaaggtccgaggtctgtttgag
aagtacgtgcagcgggcagacatggtggagatggcagggctgaacacagacctgcagcag
gagtacgcccgccagcgggagcacctggagaggaacctggccacaatcaagaagaaggtg
ctcaaggagagcgagctgcaccgcaccgactacgtccgcatcatgcaggaaaatgtttcc
ttaatcaaggaaattaatgaactccgtagggaactgaagtacacccgttctcaagtttat
gaccttgaagctgctctgaaactgtccaaaaaaatccgaacacaagaagatcaagagaca
gcatgtgggaaggatgcagagaagaagactgaccaggtctggaagatgacaggttctggg
caagggacaaggagactgggatctgaggagagacaggagagtgggtcacatggagagaac
tggcctcacacagccatgggggccaggaggcttacgctggcacagctcctggaagaacca
tcaaagggccccctgtaa
DBGET
integrated database retrieval system