Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101975751
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Entry
101975751 CDS
T10664
Symbol
Srebf2
Name
(RefSeq) sterol regulatory element-binding protein 2 isoform X1
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101975751 (Srebf2)
04131 Membrane trafficking [BR:
iti04131
]
101975751 (Srebf2)
Transcription factors [BR:
iti03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
101975751 (Srebf2)
Membrane trafficking [BR:
iti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
101975751 (Srebf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
101975751
NCBI-ProteinID:
XP_005322253
UniProt:
I3MK19
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MDESGELGGLETMETLTELGDELTLGDIDEMLQFVSNQVGEFPDLFSEQLCGSFPGSGGS
SSSSGGSGGNGRGSSGGAVDPSIQRSFSQVPLSSFSPSAASPQAPALQVKVPSTAVPTPP
RATPILQPRPQPQAQPATQLQQQTVMITPTFSTAPQTRIIQQPLIYQNAATSFQVLQPQV
QSLVTSSQVQPVTIQQQVQTVQAQRVLTQTANGTLQTLAPATVQTVAAPQVQQVPVLVQP
QIIKTDSLVLTTLKTDGSPVMAAVQNPALTALTTPIQTAALQVPTLVGSNGTILTTMPVM
MGQEKVPIKQVPGGVKQLEPPKEGERRTTHNIIEKRYRSSINDKIIELKDLVMGTDAKMH
KSGVLRKAIDYIKYLQQVNHKLRQENMVLKLANQKNKLLKGIDLGSLVDNDVDLKIDDFN
QNVLLMSPPASDSGSQAGFSPYSIDSEPGSPLLDDAKVKDEPDSPPVAIGMVDRSRILLC
VLTFLGLSFNPLTSLLQWGGAHDSDQHPYTGSGRSVLSFESGSGGWFDWMMPTLLLWLVN
GVIVLSVFVKLLVHGEPVIRPHSRSSITFWRHRKQADLDLARGDFAAAAANLQTCLSVLG
RALPTSRLDLACSLSWNVIRYSLQKLRLVRWLLKKVFQRWRATPATAAGFEDEAKSSARD
AALAYHRLHQLHITGKLPAGSACSDVHMALCAVNLAECAEEKIPPSMLVEIHLTAAMGLK
TRYGGKLGFLANYFLSRAQNLCGPERSAVPDSLRWLCHPLGQKFFMERSWSVKAAAKESL
YCAERNPADPIAQVHQAFCKNLLEQAVESLVKPQAKKKAGDQEEETCEFSSALEYLKLLH
SFVDSVGFVTPPFSSSSVLKSALGPDIICRWWTSAITMAISWLQGDDAAVRAHFTEVEHV
PKALEVTESPLVKAIFHTCRAMHASLSGKADGQQNSFCHCERASGHLWSSLNVSGATADP
ALNHVVQLLTCDLLLSLRTALWQKQAGVSQALGETYHASGAELAGFQRDLGSLRRLAHSF
RPAYRKVFLHEATVRLMAGASPTRTHQLLEHSLRRRTTQNTKHGEVDAWPGQRERATAIL
LACRHLPLSFLSSPGQRAVLLAEAARTLEKVGDRRSCSDCQQMIVKLGGGTAIAAS
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggacgagagtggcgagctgggcggcctggagaccatggagaccctcacggagctgggc
gacgagctgaccctgggggacatcgacgagatgctgcagttcgtcagcaatcaagtggga
gagttccctgacttgttttcagaacagctgtgtggctccttccctggcagtggtggtagc
agcagcagtagtggcggcagcggcggcaatggcaggggcagcagtggcggagccgtggac
ccctctatacagcggtcattcagccaggtcccgttatcttccttctctccctcagctgcc
tccccccaggctccagccctacaggtcaaggtcccttctactgcagttcccaccccacca
agggcaacccctattctccagccccggccccagccccaggctcaaccggcaactcagctg
caacagcagacagtaatgatcaccccaacattcagtactgctccacagacgaggatcatc
cagcagcctctgatctaccagaatgcagccaccagctttcaagtccttcagcctcaagtt
caaagcctggtgacatcctcccaggtacagccagtcactatccagcagcaggtgcagacg
gtacaggcgcagcgggtactgacacaaacagccaatggcacactgcagacccttgctcca
gccacagtgcagacagttgctgcaccccaggtgcagcaggtcccggtcctggtccagcct
cagatcatcaagacagattcccttgttttaaccacactgaagacagatggcagccctgtc
atggctgcagtccagaacccagccctcacagccctcaccacccctatccagacggctgcc
cttcaagtaccaaccctggtgggcagcaatgggaccattctcaccacaatgcccgtgatg
atggggcaggagaaagtgcccattaagcaggtacccgggggagtcaagcagcttgagcct
cccaaagaaggagaaaggagaacaacacacaatatcattgagaagcgatatcgctcctcc
atcaacgacaaaatcatcgagttgaaggacctggttatggggacagatgccaagatgcac
aagtccggtgttctgagaaaggctattgattacatcaaatacttacagcaggtcaatcat
aaattgcgccaagagaacatggtgctaaagctggcaaatcagaaaaacaagcttctgaag
ggcattgacctgggcagtctggtagacaatgatgtggacctgaagattgatgactttaat
cagaatgtccttctgatgtctcccccggcctccgactcagggtcccaggccggcttctcc
ccctattccattgactctgagccaggaagtcctctgttggatgatgcaaaggtcaaagat
gaaccggactctcctcctgtagcgattggcatggtggaccgctctcgaattctgctgtgt
gtcctcactttcctgggcctctcctttaacccgctgacttccctcctacaatggggaggg
gcccatgattccgaccagcacccgtacacaggctctggccgtagtgtactgtcatttgaa
tcaggttctggaggctggtttgactggatgatgccaacgctcctcctgtggctagtgaat
ggtgtcattgtcctgagtgtctttgtgaaactgctggtccatggggagccagtgatccgg
ccacattcccgttcctcaatcaccttctggaggcatcggaagcaggcggacctggacctt
gccagaggagattttgcagctgctgccgccaacttacaaacctgcctttcggttttgggc
cgggcactacccacctcccgcctggacctggcctgtagcctctcctggaacgtgatccgc
tatagcctgcagaagctgcgcctggtacgttggctgctcaagaaagttttccagcgctgg
cgggccacccctgccactgcagctggctttgaggacgaagctaagagcagcgcgcgtgat
gcagccttggcctatcataggctgcaccagctgcacatcacagggaagcttcctgcagga
tctgcctgttcagatgtacacatggctttgtgtgctgtgaacttggctgagtgtgcagag
gagaaaatcccaccaagcatgctggttgagatccatctgacagctgccatgggactcaag
acgcggtatggaggcaagctcggcttcctggctaactacttcctcagtcgtgcccagaat
ctgtgtggccctgagcgcagcgccgtccctgactccctgcgctggctctgccacccactg
ggccagaagtttttcatggagcgcagctggtcagtgaaggcagcagccaaggagagtctg
tactgtgctgagaggaacccagctgaccccattgcccaggtccatcaggccttctgcaag
aacctactagagcaagctgtggagtccttggtgaaacctcaggccaagaagaaagctgga
gaccaggaagaggagacctgtgaattctcaagcgctctagaatacctgaaattgcttcat
tctttcgtggactctgtggggtttgtgacccctccattctccagcagctctgtgctcaag
tcagcccttggtccagacatcatctgccggtggtggacgtctgcaatcactatggctatt
agctggctccagggagacgatgcagctgtgcgtgcgcattttactgaagtagagcatgtc
cccaaggccctggaagtgactgagagccccctggtgaaggccatcttccacacctgcaga
gccatgcacgcctcactctctgggaaggcagatgggcagcagaattccttctgtcattgc
gagagggccagtggccacctatggagcagcctcaatgtcagtggggccactgctgaccct
gccctcaaccacgtggtccagctgctgacctgcgacctattactgtcactgcggacagca
ctctggcaaaagcaagcaggggtcagccaggccctgggtgagacctaccatgcatcaggt
gctgagctggctggcttccagagggacctaggaagcctgcgcaggctggcgcacagcttc
cgcccagcgtaccgcaaggtgttcctccatgaagccactgtgcgcttaatggcaggagcc
agccctacccgcacccaccagctgctggagcacagccttcggcggcgcaccactcagaac
accaagcatggagaggtggacgcctggcctggccagcgagagcgggctaccgccatcctt
ctggcttgccgccaccttcccctctccttcctctcctccccgggccagcgggctgtgctg
ctggctgaggctgcccgcacgctggagaaggtgggcgaccggcgctcctgcagtgactgc
cagcagatgattgtcaagctgggaggtggcactgccattgccgcctcctga
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