Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101975808
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Entry
101975808 CDS
T10664
Symbol
Pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101975808 (Pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
iti04990
]
101975808 (Pdlim1)
Domain-containing proteins not elsewhere classified [BR:
iti04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
101975808 (Pdlim1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
DUF8106
Motif
Other DBs
NCBI-GeneID:
101975808
NCBI-ProteinID:
XP_005335353
UniProt:
I3M4J1
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MTTQQIVLQGSGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSN
MTHLEAQNKIKGCTDNMTLTVARSEHKVWSPLVTEEGKRHPYKMNLASEPQEVLHIGSAH
NRSAVPFTASPASSTAPRIIKNQYNNPAGLYSSENISSFNNAVESKTAASGEETNGRPLD
HPQPSGGLAISKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESEEKGDPNKPSGFRSV
KAPVTKVAASIGNAQKLPMCDKCGTGIVGVFVKLRDHHRHPECYVCTDCGTNLKQKGHFF
VEDQIYCEKHARERVVPPEGYDVVTVFPK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccagcagatagtcctccagggatccggaccctggggctttcgccttgtgggc
ggcaaggactttgagcagcctctcgccatttccagggtcactcctggaagcaaggctgct
ctagctaatttatgtatcggagatgtgattacagccattgatggggaaaataccagcaat
atgacgcacctggaagctcagaacaaaatcaagggctgcacagacaatatgacgctcacg
gtagccagatcggaacataaagtctggtctcctctagtgactgaggaagggaaacgccat
ccctacaagatgaatctagcttctgaaccccaagaggtcctgcacataggaagtgcccac
aaccgaagtgctgtcccctttactgcctcacctgcttccagcactgcccccaggatcatc
aaaaaccagtacaacaacccagctggcctgtactcttctgaaaacatctccagcttcaac
aacgctgtggagtccaagactgcagccagcggggaggagacgaatggcagacccttagac
catcctcagccttcaggaggccttgccatcagcaaagaatctgaagtttacaagatgctc
caggagaaacaggagttaaatgagcccccgaaacagtccacgtcattcctggttttgcag
gaaatcctagaatcagaggaaaaaggggatcccaacaaaccttcaggattcagaagtgtt
aaagctccagtcaccaaagtggccgcatcgattggaaatgctcagaagttgcccatgtgt
gacaaatgtggcactggcattgtcggagtttttgtgaagctgcgggaccaccaccgccat
cccgagtgctacgtgtgcaccgactgcggcacgaacctgaagcagaagggccatttcttc
gtagaggatcaaatctattgtgaaaagcatgcccgggagcgcgtcgtacccccggaggga
tacgacgtggtcactgtgttccccaagtga
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