Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101975982
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Entry
101975982 CDS
T10664
Name
(RefSeq) Y-box-binding protein 3-like
KO
K06099
cold shock domain protein A
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101975982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101975982
03041 Spliceosome [BR:
iti03041
]
101975982
Transcription factors [BR:
iti03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
101975982
Spliceosome [BR:
iti03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101975982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
S1CSD-TOTE-2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
101975982
NCBI-ProteinID:
XP_005328918
LinkDB
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Position
X
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AA seq
376 aa
AA seq
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MNEAGEGTSTEMAASISPQAAQKQLMSLGSGDPPGALVTGTLSGDPITKAAVAGGTKGKA
PKKVIAKRVRGSVKWFNVKNGYGFISRHDTQEDVFVHQTAITRNNPHKYQRSVGDGETVE
FDVVQGERGTEAANVTGPAGAPVEGSRYAANRPRFRPGCYINHREPPPGRSRDAKDHLDE
GEDGCTGFTACFTVAQAPRRYLPSRPQDQSLWRFPPFRRPQVLALRPSLLPHPHGPWASH
LAWSVPASKPEVTPRRGLGPSYLLSRPRGRGMPQGPGTSPVISEDLEAENKESRRKAGGP
QQRPPPRYGSRRPNNPIRHPQKAHGTEGQDLQEKEGKNPGMGPAETPVCAIVDKKSSVAE
KEDPDVPDASSAAQAE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagctggagagggcacctccacagagatggccgcttcaatctctccccaagcc
gcacagaaacaactcatgtcactgggaagcggagatcctccaggggccctagtcaccggc
accctcagcggggacccgatcactaaggccgctgtggcagggggcaccaagggaaaggct
cccaagaaggtcatcgccaagagggtgcgaggctcagtcaagtggtttaatgtgaagaat
gggtatggcttcatcagcaggcatgatactcaggaagatgtgtttgttcaccaaactgct
atcacccggaacaatcctcacaagtatcaacgcagcgtgggcgatggagagacggttgag
ttcgatgtagtgcaaggtgagcggggcaccgaggccgctaacgttactggacccgcaggt
gctccagtggagggcagccgctatgcggctaaccgtccccgcttccgcccaggctgctac
attaatcaccgtgagccaccaccgggaagatcccgggatgccaaggaccatctggatgaa
ggcgaggatggctgcacgggcttcaccgcatgcttcacagtagcccaggccccgcggcgc
taccttcccagtcgacctcaagatcaatcactgtggcgcttcccgcccttccgcaggccg
caggtcctggccctccgtccatcgctcctccctcatccccacggcccgtgggcctctcac
ctggcctggtcagtaccagcctcaaagcctgaggtcacaccgaggagggggctgggcccc
agctacttgctgagtcgacccaggggcagaggaatgcctcaggggccaggaacctcaccg
gtcatctctgaggacctggaggcagaaaataaggaaagcaggcgcaaagcaggtggccct
cagcagaggccaccaccacgctatggatcccggcgtcccaacaacccgatccgtcatccc
cagaaggcacacggcactgagggccaagaccttcaggagaaagagggtaagaaccctggg
atgggcccagctgaaactcctgtttgtgctattgtggataagaagagcagcgttgccgag
aaggaggaccctgacgtcccagacgcctcctctgcagcccaggccgagtag
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