Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101976054
Help
Entry
101976054 CDS
T10664
Symbol
Nlrp10
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 10
KO
K22266
NACHT, LRR and PYD domains-containing protein 10
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101976054 (Nlrp10)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
iti04054
]
101976054 (Nlrp10)
Membrane trafficking [BR:
iti04131
]
Autophagy
Other autophagy associated proteins
Others
101976054 (Nlrp10)
Pattern recognition receptors [BR:
iti04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101976054 (Nlrp10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
PYRIN
NOD2_WH
NLRC4_HD2
AAA_25
AAA_16
NPHP3_N
TsaE
AAA_30
AAA
nSTAND3
AAA_22
AAA_19
Motif
Other DBs
NCBI-GeneID:
101976054
NCBI-ProteinID:
XP_005326920
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MASALARSPREALLWALSDLEEDNFKILKFHLRDVTLAEGQPLLARGELEGLSRVDLASR
LILKCGEQEAVRVVLKGLKAMNLLELVDQLSHICLNDYREIYREHLRGLEESQEWGVNHS
YNQLLLVATPNSGDPGSPPSPDLEQELDSVTVETLFDLGEKPSPAPSLVVLQGSAGTGKT
TLVRKMVLDWATGTLYPGGFDYVFYVSCREVVLLQGCKLEQLLFWCCGDNQAPVTEILKQ
PERLLFILDGFDELQRPYGQLGKRVGSPMENVLRLLIRRRLLPTCSLLVTTRPPALGSLE
PMLGQRRHVHVLGFSEEERRQYFSFYFKDEEPAKHAFEFVQGNDVLYTACQVPGICWMVC
SWLKEQMERGQAISETPRSSTDIFTAYVSTFLPADDSGGSSELTRHRVLRGLCSLATEGI
EHQRFLFKEDELRKHNLDGSRLVAFLSSSNYQEELDIKKYYSFXHISFQEFFHAMSYLVK
EGQSQLGEASSREVKRLVEAKEQKKNEEMTLSTQFLLDILKKESFLTLELQFCFEVSPSV
LQDLMHFKEQMESIKHQRSWEFEFSLYNTKIKNLSKVVQLSDIQVKLSHSNERKLPTGKL
FSVKTRLDKGQKVEQKCNPEGECRGTEERDSEVRSSRMESRKKGTVEMKDQKDHGMEKQE
DGEGQSXKDGEMRDETKG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagccctggcccgcagtcctcgggaggcattactttgggccttgagtgacctc
gaggaggacaatttcaagatattaaagtttcacttgcgggatgtgaccctggctgagggc
cagcccctcttggcccgaggggagttggagggcctgagtcgggtggacctggcatcgcga
ctgattttaaagtgtggagaacaggaggctgtgagagtggtgctcaagggcttgaaggcc
atgaacttgttggaacttgtagaccagctcagccacatttgtctgaatgattacagagaa
atataccgagagcacttgcgcggcctagaggagagccaagagtggggagtcaaccacagc
tacaaccagctgctcctggtggccacacccaactcaggggacccaggatcacctcccagc
ccagacctggagcaagagctggattctgttacagtggagactttatttgatctcggggaa
aagccctcccctgccccatccttagtggtgctacaaggctctgctggtaccggaaagaca
accctggtgagaaaaatggtgctggactgggccactggtaccctgtacccaggcgggttt
gattatgtcttttatgtgagctgcagagaagtggtcctgctgcaggggtgcaaactggag
cagctcctcttctggtgttgtggggataaccaagcccctgtcacagagattttgaaacag
ccagagcggctcctgttcatcctggatggctttgatgagctacagaggccctatggacag
ctggggaagagggtggggagtcccatggagaacgtgctgcgccttttgattaggagacgg
ttgctgcccacatgctcccttctcgttaccacgcggccccctgctttggggagtctggag
cccatgctgggtcaaaggcgccatgttcatgttttaggtttctctgaggaggagaggagg
cagtatttcagcttctattttaaggatgaagagccagccaaacatgcctttgaatttgta
caaggaaatgatgttctgtacacagcgtgtcaggttccaggcatctgctggatggtctgc
tcctggctgaaggagcagatggaaagaggccaggcaatctcagagacacccaggagcagc
accgacatcttcactgcctacgtatccaccttcctgcccgctgatgacagtgggggctcc
tctgagcttaccaggcacagggtcctgaggggtctgtgctccttggccactgaggggatc
gagcatcagaggttcctatttaaagaggatgagctcaggaagcacaatttagatggctcc
aggcttgttgctttcctgagcagcagcaattaccaagaggaacttgacatcaagaagtac
tacagcttcncgcacattagtttccaggaattttttcatgcaatgtcctatctggtaaag
gaaggccaaagtcaactgggggaagcatcctccagagaagtgaaaagactggtggaagca
aaggagcagaaaaagaatgaagagatgaccctcagtacgcagtttttattggacatattg
aaaaaagagagcttcttgaccttggagcttcagttctgctttgaagtttctccctccgta
ttgcaggatcttatgcattttaaagaacaaatggaatctataaagcaccagaggagttgg
gaatttgaattctccctgtataataccaaaataaagaatctttcaaaagttgttcagttg
agtgacatccaagtcaagttgtcacattcaaatgaaaggaaattacctaccgggaagctg
ttttctgtcaaaaccagattggataaaggtcagaaagtggaacaaaaatgcaatcctgag
ggtgaatgcagagggacagaggaacgagactcagaagttagaagcagcaggatggaaagc
aggaaaaaggggacagtggagatgaaggatcagaaggatcacgggatggagaaacaggag
gatggggaagggcagagtngaaaagatggagaaatgagagatgagactaaggggtag
DBGET
integrated database retrieval system
