Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101976291
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Entry
101976291 CDS
T10664
Symbol
Snap23
Name
(RefSeq) synaptosomal-associated protein 23 isoform X2
KO
K08508
synaptosomal-associated protein 23
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04130
SNARE interactions in vesicular transport
iti04611
Platelet activation
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
101976291 (Snap23)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
101976291 (Snap23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101976291 (Snap23)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
iti04147
]
101976291 (Snap23)
Membrane trafficking [BR:
iti04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-23
101976291 (Snap23)
Exosome [BR:
iti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101976291 (Snap23)
Exosomal proteins of other body fluids (saliva and urine)
101976291 (Snap23)
Exosomal proteins of colorectal cancer cells
101976291 (Snap23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP-25
DUF5089
COG6_N
V-SNARE_C
RmuC
Sec20
DUF1664
Motif
Other DBs
NCBI-GeneID:
101976291
NCBI-ProteinID:
XP_013214707
UniProt:
I3M7E2
LinkDB
All DBs
Position
Unknown
AA seq
222 aa
AA seq
DB search
MDNMSSEEIQLRAHQVTDESLESTRRILGLAIESQDAGIKTITMLDEQGEQLNRIEEGMD
QINKDMREAEKTLTELNKCCGLCVCPCNRFSDVGCFYETRTKNFESGKAYKATWGDGGDN
SPSNVVSKQPGRVTNGQPQQPTTGAASGGYIKRITNDAREDEMEENLTQVGSILGNLKNM
ALDMGNEIEAQNRQIDRITEKADTNKDRIDNANVRAKKLIDS
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggataatatgtcatccgaagagattcaactgagggctcaccaggttactgatgagtct
ctggaaagtacaagaagaatcctgggtttagccattgagtctcaggatgcaggaatcaag
accatcactatgctggatgagcaaggggaacaactaaaccgaatagaagaaggcatggac
caaataaataaagacatgagagaagcagagaagactttaacagagctcaacaagtgctgt
ggcctttgtgtctgcccatgtaatagattctcagatgttggttgtttctatgaaaccagg
acgaagaattttgagtctggaaaggcgtataaggcaacatggggagatggcggagataat
tcacctagcaatgtagtatctaagcaaccgggccgagtaacaaatggtcaacctcagcaa
ccaactacaggagcagccagtggtggatacattaaacgtataactaatgatgccagagag
gatgagatggaagagaacctgactcaagtgggcagtatcctaggaaatctaaagaacatg
gccctggacatgggtaatgaaattgaagctcagaatcgacaaatagaccgaatcacagaa
aaggctgacaccaacaaagatcgtattgacaatgccaatgtcagagcaaagaaactcatt
gacagctaa
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