Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101976382
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Entry
101976382 CDS
T10664
Symbol
Grin1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X4
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04014
Ras signaling pathway
iti04015
Rap1 signaling pathway
iti04020
Calcium signaling pathway
iti04024
cAMP signaling pathway
iti04080
Neuroactive ligand-receptor interaction
iti04082
Neuroactive ligand signaling
iti04713
Circadian entrainment
iti04720
Long-term potentiation
iti04724
Glutamatergic synapse
iti05010
Alzheimer disease
iti05014
Amyotrophic lateral sclerosis
iti05016
Huntington disease
iti05017
Spinocerebellar ataxia
iti05020
Prion disease
iti05022
Pathways of neurodegeneration - multiple diseases
iti05030
Cocaine addiction
iti05031
Amphetamine addiction
iti05033
Nicotine addiction
iti05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
101976382 (Grin1)
04015 Rap1 signaling pathway
101976382 (Grin1)
04020 Calcium signaling pathway
101976382 (Grin1)
04024 cAMP signaling pathway
101976382 (Grin1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101976382 (Grin1)
04082 Neuroactive ligand signaling
101976382 (Grin1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
101976382 (Grin1)
04720 Long-term potentiation
101976382 (Grin1)
09159 Environmental adaptation
04713 Circadian entrainment
101976382 (Grin1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101976382 (Grin1)
05014 Amyotrophic lateral sclerosis
101976382 (Grin1)
05016 Huntington disease
101976382 (Grin1)
05017 Spinocerebellar ataxia
101976382 (Grin1)
05020 Prion disease
101976382 (Grin1)
05022 Pathways of neurodegeneration - multiple diseases
101976382 (Grin1)
09165 Substance dependence
05030 Cocaine addiction
101976382 (Grin1)
05031 Amphetamine addiction
101976382 (Grin1)
05033 Nicotine addiction
101976382 (Grin1)
05034 Alcoholism
101976382 (Grin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
iti04040
]
101976382 (Grin1)
Ion channels [BR:
iti04040
]
Ligand-gated channels
Glutamate (ionotropic)
101976382 (Grin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
101976382
NCBI-ProteinID:
XP_005336948
UniProt:
A0A287CU97
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MSTMRLLTLALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTALLLEARELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTQYHPTDITGPLNLSDPSVSTVV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgacactcgccctgcttttctcctgctccttcgcccgcgcc
gcctgcgaccccaagatcgtcaacatcggtgcggtgttgagcacgcgcaagcacgagcag
atgttccgcgaggccgtgaaccaggccaacaagcggcacggctcctggaagatccagctc
aacgccacctcggtcacccacaagcccaatgctatccagatggccctgtcggtgtgtgag
gacctcatctccagccaggtctatgccatcctagttagccacccacctactcccaatgac
cacttcactcccacgcctgtctcctacacagctggcttctaccgcatccccgtcttgggg
ctgaccacccgcatgtccatctactcagacaagagcatccacctgagcttcctgcgcacc
gtgcctccctactcgcaccagtcgagcgtttggtttgagatgatgcgcgtctacagctgg
aaccacatcatcctgctggtcagcgatgaccacgagggccgggctgcgcagaagcgcctg
gagacgctgctggaggagcgcgaatccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgacaacaagcgcggacccaaggcagagaaggtgctgcagttcgaccct
gggaccaagaatgtgacagccctgctgctggaggctcgagagctggaggcccgggtcatc
atcctctctgccagtgaggacgacgctgccaccgtctaccgcgcggctgcgatgctgaac
atgacgggctcggggtacgtgtggctggtgggggagcgcgagatctcagggaacgccctg
cgctatgcgcccgacggcatcatcgggctgcagctcataaatggcaagaacgagtcagcc
cacatcagtgatgcggtgggcgtggtggcccaggctgtgcatgagctgctggagaaggag
aacatcaccgacccgccgcggggctgcgtgggcaacaccaacatctggaagactgggcca
ctcttcaagagggtgctgatgtcttccaagtatgcagacggagtgactggccgtgtagaa
ttcaatgaggacggggaccggaagtttgccaactacagcatcatgaatctgcagaaccgc
aagctggtgcaagtgggcatctacaatggcacccacgtcatccctaatgacaggaagatc
atctggccaggtggagagactgagaagcctcgagggtaccagatgtctaccagactaaag
atcgtgaccatccaccaggagcccttcgtgtatgtgaagcctaccctgagcgatgggacg
tgcaaggaggagttcacagtcaatggagacccagtcaagaaggtgatctgcactgggccc
aacgacacgtctccaggcagcccacgtcacacggtgcctcagtgctgctacggcttctgc
attgacctgctcattaaactggcacggaccatgaacttcacctatgaggtgcacctggtg
gcagacggcaagttcggcacacaggaacgggtgaacaacagcaacaagaaggagtggaat
gggatgatgggcgagctgcttagcgggcaagcggacatgattgtggcaccactgaccatc
aacaatgagcgtgcacaatacatcgagttttccaagcccttcaagtaccagggcctgacc
attctggtcaaaaaggagataccccgtagcacactggactcgttcatgcagccctttcag
agcacactgtggctactggtggggctgtcagtgcacgtggtagctgtgatgctctatctg
ctggaccgcttcagcccttttggccggttcaaggtgaacagcgaggaggaggaggaggat
gctctgaccctgtcttctgccatgtggttctcctggggcgtgctgctcaactccggcatt
ggggaaggtgcccccagaagtttctccgcacgcatcctgggcatggtgtgggctggcttt
gccatgatcattgtggcctcctacactgccaacctggcggctttcctggtcctggaccga
ccggaggagcgtatcacaggcatcaacgaccctcggctcaggaacccctcggacaagttc
atctatgctactgtgaagcagagctcggtggacatctacttccggcggcaggtggagctg
agcaccatgtatcggcacatggagaaacataactatgagagtgcagccgaggccatccag
gccgtgcgggacaacaaactccatgccttcatctgggactcagcagtgctggagttcgag
gcttcgcagaagtgtgacttggtgaccactggcgagctgttcttccgctctggcttcggc
attggcatgcgcaaggacagcccctggaagcagaatgtctccctgtctattctcaagtcc
catgagaatggcttcatggaagacctggacaagacttgggttcggtaccaggaatgcgac
tcgcgcagcaatgcccctgcgacactcacttttgagaacatggcaggggtcttcatgctg
gtggctggaggcatcgtggctgggatcttcctgattttcattgagatcgcctacaaacgg
cacaaggatgcccgaagaaagcagatgcagctggccttcgccgcagtgaacgtgtggagg
aagaacctgcaggatagaaagagtggtagagcagagcctgaccctaaaaagaaagccaca
tttagggctatcacctccaccctggcatccagcttcaagagacgtaggtcctccaaagac
acgcagtaccatcccactgatatcacgggcccgctcaacctctcagatccctcggtcagc
accgtggtgtga
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integrated database retrieval system
