Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101976595
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Entry
101976595 CDS
T10664
Symbol
Syngap1
Name
(RefSeq) ras/Rap GTPase-activating protein SynGAP isoform X7
KO
K17631
Ras/Rap GTPase-activating protein SynGAP
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
101976595 (Syngap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAB2P_C
RasGAP
C2
PH
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
101976595
NCBI-ProteinID:
XP_005318865
LinkDB
All DBs
Position
Unknown
AA seq
1315 aa
AA seq
DB search
MHRTQYVHSPYDRPGWNPRFCIISGNQLLMLDEDEIHPLLIRDRRSESSRNKLLRRTVSV
PVEGRPHGEHEYHLGRSRRKSVPGGKQYSMEAAPAAPFRPSQGFLSRRLKSSIKRTKSQP
KLDRTSSFRQILPRFRSADHDRARLMQSFKESHSHESLLSPSSAAEALELNLDEDSIIKP
VHSSILGQEFCFEVTTSSGTKCFACRSAAERDKWIENLQRAVKPNKDNSRRVDNVLKLWI
IEARELPPKKRYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLY
RDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGG
SGGKGKGGCPAVRLKARYQTMSILPMELYKEFAEYVTNHYRMLCAVLEPALNVKGKEEVA
SALVHILQSTGKAKDFLSDMAMSEVDRFMEREHLIFRENTLATKAIEEYMRLIGQKYLKD
AIGEFIRALYESEENCEVDPIKCTASSLAEHQANLRMCCELALCKVVNSHCVFPRELKEV
FASWRLRCAERGREDIADRLISASLFLRFLCPAIMSPSLFGLMQEYPDEQTSRTLTLIAK
VIQNLANFSKFTSKEDFLGFMNEFLELEWGSMQQFLYEISNLDTLTNSSSFEGYIDLGRE
LSTLHALLWEVLPQLSKEALLKLGPLPRLLNDISTALRNPNIQRQPSRQSERPRPQPVVL
RGPSAEMQGYMMRDLNSSIDLQSFMARGLNSSMDMARLPSPTKEKPPPPPPGGGKDLFYV
SRPPLARSSPAYCTSSSDITEPEQKMLSVNKSVSMLDLQGDGPGGRLNSSSVSNLAAVGD
LLHSSQASLTAALGLRPAPAGRLSQGSGSSITAAGMRLSQMGVTTDGVPAQQLRIPLSFQ
NPLFHMAADGPGPPAGHGGSGGHGPPSSHHHHHHHHHHRGGEPPGDTFAPFHGYSKSEDL
SSGVPKPPAASILHSHSYSDEFGPSGTDFTRRQLSLQDNLQHMLSPPQITIGPQRPAPSG
PGGGSGGGSGGGGGGQPPPLQRGKSQQLTVSAAQKPRPSSGNLLQSPEPSYGPARPRQQS
LSKEGSIGGSGGSGGGGGGGLKPSITKQHSQTPSTLNPTMPASERTVAWVSNMPHLSADI
ESAHIEREEYKLKEYSKSMDESRLDRVKEYEEEIHSLKERLHMSNRKLEEYERRLLSQEE
QTSKILMQYQARLEQSEKRLRQQQVEKDSQIKSIIGRLMLVEEELRRDHPAMAEPLPEPK
KRLLDAQERQLPPLGPTNPRVTLAPPWNGLAPPAPPPPPRLQITENGEFRNTADH
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgaacccaatacgttcattccccgtatgatcgtcctggttggaaccctcggttc
tgcatcatctcggggaaccagctgctcatgctggatgaggacgagatacaccccctcctg
atccgggaccggaggagcgagtccagccgcaacaaactgctgagacgcacagtctccgtg
ccggtggaggggcggccccacggcgagcatgaataccacttgggtcgctcgaggaggaag
agtgtcccaggggggaagcagtacagcatggaggccgcccccgctgcgcccttccggccc
tcgcaaggcttcctgagccggagacttaaaagctccatcaagcgtacgaagtcacagccc
aaacttgaccggaccagcagctttcgccagatcctgcctcgcttccgaagtgctgaccat
gaccgggcccggctgatgcaaagctttaaggagtctcactcccatgagtccttgctgagt
cctagcagtgcagctgaggccttggagctcaacttggatgaagattccattatcaagcca
gtgcacagctccatcctgggccaggagttctgttttgaggtaacaacatcatcaggaaca
aaatgttttgcctgtcggtccgcagccgaacgggacaaatggatcgagaatctccagcgg
gcagtaaaacccaacaaggacaacagccgccgggtggataatgtgctgaagctgtggatc
atagaggcacgggaactgccccctaagaagcggtactactgcgagctctgcctagatgac
atgctgtatgcacgcaccacgtccaagccccgctcagcctctggggacaccgtcttctgg
ggcgagcacttcgagtttaacaacctgccggctgtccgcgccctgcggctgcatctgtac
cgtgactcagacaaaaagcgcaagaaggacaaggcaggctatgtaggcctggtgactgtg
cccgtggccaccctggctgggcgccacttcacagagcagtggtaccctgtgaccctgcca
acaggcagtggagggtctgggggcatgggttcgggagggggaggaggctcggggggtggc
tcagggggcaagggcaaaggaggttgcccggctgtgcggctgaaggcacgttatcagaca
atgagtatcttgcccatggagctgtacaaagagtttgcagaatatgtcaccaaccattat
cggatgctgtgtgcagtattggaacctgccttgaatgtcaagggcaaggaagaggttgcc
agcgcactggttcacatcttgcagagtacaggaaaggccaaggacttcctttcagacatg
gccatgtcagaggtagaccggttcatggaacgggagcacctcatattccgcgagaacacg
ctcgccactaaagccatagaagagtatatgagattgattggtcagaaatacctcaaggat
gccattggggagttcattcgtgctctgtatgaatctgaggagaactgtgaggtagacccc
atcaagtgcacggcatccagtctggcagagcaccaggccaacctgcggatgtgctgtgag
ttggccctgtgcaaggtggtcaactcccattgcgtgttcccgagggagctgaaggaggtg
tttgcatcttggcggctgcgctgcgcagagcggggcagggaggacatcgccgacaggctg
atcagcgcctcgctcttcctgcgcttcctctgcccagccattatgtcgcccagtcttttt
gggctcatgcaggagtacccagatgagcagacctcacgaaccctcaccctcatcgccaag
gtcatccagaacttggccaacttttccaagtttacctcaaaggaggactttctgggtttc
atgaatgagtttttggagctggagtggggttccatgcagcagttcctgtacgagatctcc
aacctggacacgctgaccaacagcagtagctttgagggctacatcgacttgggccgagag
ctctccacattgcatgccctactctgggaggtgctgccccagctcagcaaggaagccctt
ctgaagctgggcccactaccccggcttctcaacgacatcagcacagccctaagaaacccc
aacatccaaaggcagccaagccgccagagtgagcggccccggccgcagcccgtggtgctg
cgggggccatcagctgagatgcagggctacatgatgcgggacctcaacagctccatcgac
cttcagtccttcatggctcgaggcctcaacagctctatggacatggctcgtctcccctcc
ccaaccaaggaaaagccacccccaccaccccctggtgggggtaaagatctgttctacgtg
agccgaccaccactggcccggtcctccccagcatactgcacaagcagctcggacatcaca
gagccagaacagaagatgctgagtgtcaacaagagtgtgtccatgctggacctgcagggc
gatgggcccggtggtcgcctcaacagcagtagtgtttccaacctggcagctgtcggggac
ctgctgcattcaagccaggcctcactcacagcggccttagggctgcggcctgctcctgct
ggacgcctctcccaggggagtgggtcgtccatcacagcggcgggcatgcgcctcagccag
atgggtgtcaccacggacggtgtccctgcccagcaactgcgcatccccctctccttccag
aaccctctcttccacatggctgctgatgggccagggcccccagcgggccatggagggagt
ggtggccatggcccaccctcttcccatcaccaccaccaccaccatcaccaccaccgaggt
ggagagcccccaggggacacctttgccccattccatggctatagcaagagcgaggacctc
tcttcaggggtccccaagcccccagcagcctccatccttcatagccacagctacagtgat
gagtttggaccctctggcactgacttcacccgacggcagctctcactccaggacaacctt
cagcatatgctgtcccctccccagatcaccattggtccccagaggccagccccctcaggg
cccggaggtgggagtggtgggggcagtggtgggggtggtggggggcagccacctccgttg
cagaggggaaagtctcagcagttgacagtcagtgctgcccagaaaccccggccgtccagc
gggaaccttttacagtctccagagccgagttatggccctgcccgtccacgacaacagagc
ctcagcaaggagggcagcattgggggcagcggtggcagtggtggcggagggggtgggggg
ctgaagccctccatcaccaagcagcattctcagacaccatccacgctgaaccccacaatg
ccagcctctgagcggactgtggcctgggtctccaatatgcctcacctgtcggctgacatc
gagagtgcccacattgagcgggaagagtacaagctcaaggagtactcaaaatcgatggat
gagagccggctagatagggtaaaggagtacgaggaagagatccattcactgaaggaacgg
ctgcacatgtccaaccggaagctggaagagtatgagcggaggctgctgtcccaggaagaa
cagaccagcaaaatcttgatgcagtatcaggcccgactagaacagagtgagaagaggctg
aggcagcagcaggtggagaaggattctcagatcaagagcatcattggcaggctgatgctg
gtggaggaggagctgcgccgggaccaccccgccatggctgagccgctgcctgaacccaag
aagaggctgctcgacgctcaggagaggcagcttccccccttgggtccaacaaacccgcgt
gtgacgctggccccaccttggaacggcctggcccccccagccccgccccccccaccccgg
ctgcagatcacggagaacggcgagttccgaaacaccgcagaccactag
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