Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101976675
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Entry
101976675 CDS
T10664
Symbol
Scn10a
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
Ion channels [BR:
iti04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101976675 (Scn10a)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101976675
NCBI-ProteinID:
XP_005317442
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Position
Unknown
AA seq
1953 aa
AA seq
DB search
MEFPLGSLETTNFRRFTPESLAEIEKRIAAHQAEKKVKDKPREKKDQEEKPRPQLDLKAC
NQLPKFYGELSAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWIFSPFNLIR
RTAIKMSVHSWFTVFITATIVVNCVCMTRTDLPEKIEYIFTVIYTFEALIKILARGFCLN
EFTYLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALI
HSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVRNDTAPDDTSNYSSHRTHVSYVI
KPGTSDPLLCGNGSDAGHCPVGSICLKTSENPDFNYTSFDSFAWAFLSLFRLMTQDSWER
LYQQTLRASGKIYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIAEIEAKEKKFQE
ALEMLRKEQEVLTALGIDTASLHSHNGSPLASKNASERKHRMKSRVSDCSTDDNRSPQSE
TYNQRRMSFLGLASGRRRASHGSVFHFRAPGQDVSFHDGITDDGVFHGDHESRRGSLLLS
KVVGPPGPLSQTPSLGSGHGEEGHPMLTTSELVPGATEVPAFDAGQKKTLLSAEYLNEPF
RVQRAMSVVSIMTSVIEELEDSQQRCPPCLTTLAQKYLIWKCCPTWVKLKTVLYELVTDP
FAELAITFCIVVNTVFMAMEHHGMSSAFETMLHIGNIVFTIFFTAEMVFKIIAFDPYYYF
QKRWNIFDCVIVTVSLLELSVAKKGSLSVLRTFRLLRVFKLAKSWPTLNTLIKIIGNSVG
ALGNLTIILAIIVFIFALVGKQLLGEDYGAHRSVIAVPGDEWPRWHMHDFFHSFLIVFRI
LCGEWIENMWACMEVSQKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADNLTAPEDDG
EVNNLQVALARIQAFGRRTKQALRGFFSRPCLPRWPKPEPPLWMKPSISISKAENHIVAD
ATSMRSPGGLPALRDPREDHGDFITNPNVWVSVPIAEGESDLDDLEDDGEQDAQGSCQEV
LPKVQQEQLQQVGRYEDHLAPRSPGSGISSEDLTPYVGEQWKDTAAPQVPAEEVDDTSSS
EGSTVDCPDPEEILKKIPELADDLEEPEDCFTEGCMRHCPCCKVDATKFPWDMGWQLRKT
CYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPKVKALLEYSDRVFTFIFVFEMLLK
WVAYGFKKYFTNAWCWLDFLIVNISLTSLIAKILEYSDMESIKALRTLRALRPLRALSRF
EGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWRCINNTNKDFSLVHWS
IVNNISDCQNQNNSDNFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVDSREVDI
QPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPLNRYQGFIFDVVTRQAFDIAIMVLICLNMITMMVETDEQSEEK
TKILGKINQFFVAVFTGECVLKMFALRQYYFTNGWNVFDFIVVILSIGSLVFSAILTSLE
NYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIF
GMSSFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTEPPYCDPNLPN
GNSTRGDCGNPAVGIVFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLSEDDFDMF
YETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNQKILIQMDMPLVPGDKIHCLDIL
FAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQEDISATVIQKAYRS
YVLYRSLTLSNPSGVPRTEEEALSHPDEGFVEFMANENCVLPDKFETASATSFPPSYDSV
TRGLSDRVNMSTSSSMKNEDEATSKEVTAPDPE
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atggaattccccttggggtccctggaaacgaccaacttccgtcggttcactccagagtca
ctggcagagattgagaagcgaattgctgcccatcaggcagaaaagaaagtcaaagacaag
cctagagagaagaaggaccaagaagagaagccacggccccagctggacttgaaagcctgc
aaccagctgcccaagttctatggtgagctctcagcagaactggtcggggagcccctggag
gatctagaccccttctacagcacacaccggacatttatggtgctgaacaaaggcaggacc
atttcccggtttagtgccactcgagccctttggatattcagccccttcaacctgatcaga
agaacggccatcaaaatgtctgtccactcgtggttcactgtatttattactgccaccatt
gtggtcaattgtgtgtgcatgacccgaaccgatcttccagagaaaatcgagtacatcttc
acggtcatttacacctttgaagctttgatcaagatactggcaaggggattttgtctaaat
gagttcacttacctgcgagatccttggaactggctggactttagcgtcatcaccctggca
tatgttggtgcagcaatagatctccgaggaatctctggcctgaggacgttcagagttctt
agagctttaaaaacagtttctgtgatcccagggctgaaggtcattgtaggagccctgatc
cactcggtgaggaaactggctgatgtgaccatcctcaccgtcttctgcctgagtgtcttc
gccctggtgggcctgcagctcttcaagggtaacctcaagaacaagtgtgtcaggaatgac
acagctccagatgacacctctaattactcatctcacagaacacatgtatcgtatgttatt
aagccaggcacttctgatcctttactgtgtggcaatggatctgatgcaggccactgccct
gttggttccatctgccttaaaacttctgaaaacccagattttaactataccagctttgat
tcctttgcttgggctttcctctcactgttccgcctcatgacacaggattcctgggaacgc
ctctaccagcagactctcagagcttctgggaaaatttatatggtcttttttgtgctggtc
atcttcctgggatctttctacctagtcaacttgatcctggctgtggtcaccatggcgtac
gaggaacagaaccaagcaacaattgctgaaattgaagcaaaggagaagaagttccaggag
gccctggagatgctccggaaggagcaggaggtgctgacagcactggggattgacacagcc
tctctccattcccacaatggatcacctttagcctccaaaaatgccagtgagagaaagcac
agaatgaaatcaagagtgtcggactgctccacagatgacaacagatcaccccaatctgag
acttacaaccagcgcaggatgtctttcctaggccttgcttctggaaggcgtcgggctagc
catggcagtgtgtttcatttccgagcccctggccaagatgtctcattccacgatgggatc
acagatgatggagtctttcatggagaccatgagagccgacggggttctctgctgctgagc
aaggttgttggaccgccaggcccactgtctcaaactcccagccttggctctgggcatgga
gaagagggacacccaatgctgaccactagtgagctggtccctggagccacagaagtcccg
gcattcgatgcaggacagaagaaaactttattgtcagcagaatatttgaatgaacctttc
agagtccaaagagcaatgagtgtggtcagtatcatgacctctgtcatcgaggaacttgag
gactctcaacagcggtgcccaccctgcttgaccactttggctcagaagtatctgatctgg
aagtgctgcccgacatgggtgaagctcaagacagtgctctatgagctggtgacagacccc
tttgcagaactcgccatcactttctgcatcgtggtgaacacagtcttcatggccatggag
catcacggcatgagctctgccttcgaaaccatgctccacataggcaacattgtctttacc
atattttttactgctgaaatggtcttcaagatcattgccttcgacccctattattacttc
cagaagaggtggaatatcttcgactgtgtcatcgtcaccgtgagcctgctggagctgagc
gtggccaaaaagggaagcttgtctgtgctgcggaccttccgcttgctgcgggtcttcaag
ctggccaagtcctggcccaccttgaacacgctcatcaagatcatcgggaactcggtgggg
gcgctggggaacctgaccatcatcctcgccatcattgtcttcatcttcgctctggttggc
aagcagctgctcggggaagactacggggctcaccgttctgttatcgctgtgccaggggat
gaatggcctcgctggcacatgcatgacttcttccattccttcctcattgtcttccggatc
ctctgtggagagtggatcgagaacatgtgggcctgcatggaagtcagccagaaatccata
tgcctcatcctcttcttgacggtcatggtgctgggaaacctggtggtgctcaacctgttc
atcgccctgctgctgaactctttcagtgccgacaacctcactgcaccagaggatgacggg
gaagtgaacaacctgcaggtggccctggcacggatccaggcttttggccgtcgcaccaag
caggcacttcgcggcttcttcagcaggccctgcctgccccgctggcccaagccagagccc
ccgctgtggatgaaaccctccatctctatctccaaagccgagaaccacattgttgccgat
gctacttctatgaggagccctggagggctgccagctctcagagaccccagggaggaccac
ggtgacttcatcaccaatcctaacgtgtgggtctctgtgcccattgctgagggtgaatct
gatctcgatgacttggaggatgatggtgagcaggatgctcagggctcctgccaggaagtg
ctccccaaagtacagcaggagcagctgcagcaagtcgggaggtacgaggaccacctggca
cctaggagcccaggctctggtatctcctctgaggacctaactccatatgtgggtgagcag
tggaaagacacagctgctcctcaggttcctgcagaggaagtggacgatacaagctcctca
gagggcagcactgtggactgcccagaccccgaggagatactgaagaagatccctgagctg
gcagatgacctggaagaaccagaggactgcttcacagaaggctgcatgcgacactgtccc
tgctgcaaagtggatgccaccaagttcccgtgggacatgggctggcagctgcgtaagacc
tgctaccgcatcgtggagcacagctggtttgagagcttcatcatcttcatgatcctgctt
agcagtgggtctctggcctttgaagattattacctggaccagaagcccaaggtgaaggct
ttgctggaatactctgacagggtgttcacctttatctttgtgtttgagatgctgctcaag
tgggtggcctatggcttcaagaagtacttcaccaacgcctggtgctggctggacttcctc
attgtgaatatctcactgacgagcctcatagcgaagatcctggaatattctgatatggaa
tccatcaaagcccttcggaccctccgtgccctgcgaccactgcgggctctgtcgcgtttc
gaaggcatgcgggtggtggtcgatgccttggtgggcgccatcccatccattatgaatgtc
ctcctggtctgcctcatcttctggctcatcttcagcatcatgggagtgaacctcttcgca
gggaagttttggaggtgcatcaacaataccaacaaagacttttctcttgtgcattggtca
attgtgaataacatttctgattgtcagaatcaaaacaacagtgacaactttttctgggtc
aacgtgaaagtcaactttgacaatgttgcaatgggttacctcgcacttcttcaggtggca
acttttaaaggctggatggacatcatgtatgcggctgttgattcccgagaggtcgacatt
cagcccaagtgggaggacaacgtgtacatgtacttgtacttcgtcatcttcatcattttt
ggtggcttcttcacactgaatctctttgttggggtcataattgacaacttcaatcaacag
aaaaaaaagttagggggccaggacatcttcatgacagaggaacagaagaaatactacaat
gccatgaagaagttgggctccaagaagccccagaagcccatcccacggcccctgaacagg
taccagggattcatctttgatgtcgtgaccaggcaagcctttgacattgccattatggtc
ctcatttgcctcaacatgatcaccatgatggtggagacagatgagcagagcgaagaaaag
accaaaatcctcggcaaaatcaatcagttcttcgtggctgtcttcacgggcgagtgcgtc
ttgaagatgttcgccttgaggcaatactatttcaccaacggctggaatgtgtttgacttc
attgtcgtgatcctctccatcgggagtctagtgttttctgcgattcttacatcactagaa
aattacttctctcccacactcttccgagtcatccgcctggcccgaatcggtcgcatcctc
agactgatccgagcagccaaggggatccgcacgctgctctttgccctcatgatgtccctg
cctgccctcttcaacatcgggctgctgctcttcctcgtcatgttcatctactccatcttc
ggcatgtccagctttgcttacgtcaagtgggaggccgggatcgatgacatgttcaacttc
cagaccttcgccaacagcatgctgtgcctcttccagatcaccacgtcagccggctgggat
ggcctcctcagccccatcctcaacacagagcccccctactgcgaccccaatctgcccaat
ggcaatagcacgagaggagactgtgggaacccagccgtgggcatcgtcttcttcaccacc
tacatcatcatctccttcctcatcgtggtcaacatgtacattgcagtgattctggagaac
ttcaatgtagccacagaggagagcacagagcccctgagtgaggacgatttcgacatgttc
tatgagacctgggagaaattcgacccggaagccacccagttcattaccttttctgccctc
tcagactttgcagacactctctcaggccccttgagaatcccaaaacccaatcagaaaata
ttaatccagatggacatgcccttggtccctggagataagatccactgtttggacatcctc
tttgccttcaccaagaacgtgctgggagaatctggagagttggattcactaaaggcaaac
atggaggagaagtttatggcaactaatctttcaaaagcgtcctatgagccaatagcaacc
accctccggtggaaacaagaagacatttcagccactgtcattcaaaaagcttatcggagt
tatgtgctctatcgctccttgacactctccaacccctctggagtgcccaggactgaagag
gaggctttgtcacacccagatgaaggctttgtggaatttatggcaaatgagaattgtgtc
cttccagacaaatttgaaactgcatctgccacatctttcccgccatcctatgacagcgtc
actagaggcctcagtgacagagtcaacatgagcacatccagctcaatgaaaaatgaagat
gaagccaccagtaaggaggtgactgcacctgaccctgagtga
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integrated database retrieval system
