Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101976736
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Entry
101976736 CDS
T10664
Symbol
Snx13
Name
(RefSeq) sorting nexin-13 isoform X2
KO
K17925
sorting nexin-13
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
iti04990
]
101976736 (Snx13)
Domain-containing proteins not elsewhere classified [BR:
iti04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
101976736 (Snx13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
101976736
NCBI-ProteinID:
XP_005328839
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MLTEASLSIWGWGSLGVVLFLVTFGPFVIFYLAFYILCFVGGGLVVTLLFGKTNSEKYLE
QCEHSFLPPTSTGVPKCLEEMKREARTIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQPYFTTRIVDDFGTHLRVFRKAQQRIT
EKDDQVKGTAEDLIDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPGD
FQNKIMRYFVREILARGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVRDKAAEELQYLRSLDTAGDDINTIKNQINSLLFVKKVCDSRIQRLQSGKEINTV
KLAANFGKLCTVPLDSILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
LSRQRDGKHQTNQTKGLLRAAAVGIYEQYLSEKASPRVTVDDYLVAKLADTLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDMLKDPSFRGSDDGDGESFNGSPT
GSINLSLDDLSSVSSDDSVQLHAYISDTGVCNDHGKTYALYAITVHRRNLNSEEMWKTYR
RYSDFHDFHMRITEQFENLSSILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLTPEMMK
ASPALAHCVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKSLPDSLAEGMTK
MSDNMGKMSERLGQDIKQSFFKVPPLITKTDSDPEHCRVSAQLDDNVDDNIPLRVMLLLM
DEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQVADSVKRFRDA
FWPNGILAESVPCRDKAIRMRTRIAGKTKLFAIMPDELKHIIGAETTRKGILRVFEMFQH
NQLNRRMVYVFLEGFLETLFPQYKFRELFNKLHSRSKQMQKYKQKLQTTQAPSLQKR
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgttaacagaggccagtctatccatatggggatggggaagccttggcgttgtccttttt
ctagtaacctttggaccctttgtaatattttatttggccttttatatcctctgctttgtg
ggtgggggtttagtggttacccttctgtttggaaaaacaaactcagaaaagtacctagag
cagtgtgaacactcatttcttcctccaacatcaactggggttcctaagtgcttagaagaa
atgaaacgggaagccaggactattaagattgatagaagattgacgggtgccaatataatt
gatgaacctctccagcaagttatccagttttccttgagggattatgtccagtattggtat
tacacactaagtgatgatgagtcttttcttcttgaaattaggcagactcttcagaatgct
ctcattcagtttgctactaggtcaaaagaaatagactggcaaccttattttactacacgc
attgtagatgattttggcacacacctacgagtattcagaaaggctcaacagagaataaca
gagaaagacgatcaagtaaaaggcacagcagaagatcttatagataccttcttcgaagtt
gaagttgaaatggagaaggaagtttgccgtgacctagtgtgcacttctcccaaagatgaa
gaaggattcctaagagatttgtgtgaggtcttattatatttattgctacctcctggagat
ttccagaacaagatcatgcgatactttgtcagggaaatccttgcacgaggaattcttctt
ccattaataaatcaactcagtgatcctgattatattaatcagtatgtcatatggatgatc
cgtgattctaattgcaactatgaggcctttatgaacattattaaattgagtgacaatatt
ggagaattggaagcagttagagataaggcagcagaagaattacagtatcttagatcttta
gatacagctggtgatgatatcaataccatcaaaaatcaaataaatagcttattatttgta
aagaaagtatgtgactcaagaatacagcggttgcagtcaggcaaagaaataaatactgtg
aaactggcagcaaactttgggaaactttgcacagtccctctggacagcattcttgtagac
aatgttgcactacagttttttatggattacatgcagcaaactggaggtcaagcacatctt
ttcttctggatgacagtggagggctaccgggttacagcccaacaacagctagaggtttta
ttaagtcgtcaaagagatggaaaacatcaaacgaaccaaaccaaaggtcttttaagagca
gctgctgttggaatttatgaacaatatttgtctgaaaaggcatctccaagagttactgtg
gatgactatttagtagcaaaattggcagacactttgaatcatgaagatccaacccctgaa
atctttgatgacattcaaagaaaggtatatgagttgatgctacgagatgaaagattttat
ccttccttcagacaaaatgcactttatgtgcgcatgttagctgagctggacatgttaaaa
gatcctagtttcagaggatcagatgatggggatggagaatcttttaatgggtctcctaca
ggaagcataaatttgtctttagatgacctttcaagtgtatcttctgatgactcagtacaa
cttcatgcttacatttcagacactggcgtttgtaatgatcatggcaagacatacgcatta
tatgccatcaccgtacaccggcgcaatctaaacagtgaggaaatgtggaaaacctatcgt
cggtatagtgacttccatgacttccacatgagaattactgaacagtttgaaaatttgtca
agcatattgaagcttcctggtaaaaagacttttaataatatggatagagattttttagaa
aagagaaaaaaggatctaaatgcctatttgcagttactgttaactcctgaaatgatgaaa
gcatctccagctttggctcactgtgtgtatgatttccttgagaacaaagcctacagtaaa
ggaaaaggggactttgctcgtaagatggacacttttgtaaatccacttcgaaattctatg
aggaatgtttcaaatgcagttaaatcccttcctgatagtttggcagaaggaatgactaaa
atgtcagacaacatgggcaaaatgtcagaaagattaggtcaagacataaagcagtcattt
ttcaaggtgcctcctttaattacaaagactgattcagatcctgaacattgtcgagtctca
gctcaacttgatgataatgtggatgacaatattccacttagggtaatgctgcttctcatg
gatgaagtattcgacttaaaagagagaaatcagtggttgcgaagaaatatcaaaaactta
cttcagcagcttattagagctacatatggtgatactataaatagaaaaatagttgaccat
gttgattggatgacctcacctgaacaagtagctgactcagtgaaacgtttcagagatgca
ttttggccaaatggcattttagcagagtctgttccatgcagagataaagctattcgaatg
agaacaagaattgcaggaaaaactaaattatttgcaattatgccagatgaactgaagcac
attattggagctgagacaacacggaaaggcattcttcgtgtttttgaaatgtttcagcac
aaccagctaaataggagaatggtttatgtcttcttggaaggctttttagaaaccttattt
ccacagtataaattccgtgaacttttcaacaaactgcattcacggtcaaagcagatgcag
aaatataaacagaaacttcaaactactcaagcgccttctttacaaaaaaggtga
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