Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101976818
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Entry
101976818 CDS
T10664
Symbol
Tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iti02000
]
101976818 (Tmc1)
03037 Cilium and associated proteins [BR:
iti03037
]
101976818 (Tmc1)
Transporters [BR:
iti02000
]
Other transporters
Pores ion channels [TC:
1
]
101976818 (Tmc1)
Cilium and associated proteins [BR:
iti03037
]
Other cilia and associated proteins
Stereociliary proteins
101976818 (Tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Casc1_N
DUF4778
Toddler
Motif
Other DBs
NCBI-GeneID:
101976818
NCBI-ProteinID:
XP_013213497
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MAPALAPQQPAERHRAFFKHQFVVQLLDQLQATLTLTGLQSLPVGCPTFTVALLQPLLNT
GPGKKRADKNTVKPYTSSSGEEEEEKLPRRESLRPKRKRTRDVINEDDPIPEPEDEETRK
AREKERRRRLKRGAEEEEEIDAEELERLKAELDEKRQIIATVKCKPWKMEKKIEVLKAHV
RGTEPDGMTPLSGEKWAKFLRDFENFKAACIPWENKIKAIESQFGSSVASYFLFLRWMYG
VNMVLFILTFSLIMLPEYLWGLPYGSLPRKTVPRAEEASAANFGVLYDFNGLAQYSVLFY
GYYDNKRTIGWMNFRLPLSYFLVGIMCIGYSFLVVLRAMTKNIGDDGGGDDNTFNFSWKM
FCSWDYLIGNPETADNKFNSITMNFREAITEERAAQVEENVHLIRFLRFLANFFVFLTLG
ASGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGMFCPTLFDLFAELEDYHPLI
ALKWLLGRIFALLLGNLYVFILALMDEINNKIEEEKLVKANITLWEANMIKAYNASLSEN
TTGLPFFVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYVTILIGDFLRACFVRFCNYCW
CWDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLPGINILRLHTSMYFQCWAVM
CCNVPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSLPPSFDCGPFSGKNRMFEVI
GETLENDFPSWMAKILRQLSNPGLVIAVVLVMGLTIYYLNATAKGQKVANLELKKKMKLQ
ALENKMRNKKMAAARAAVAAGGQ
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggctccagctttagctccacagcagccagctgaaagacacagagcatttttcaaacac
cagtttgtggtgcagcttctggatcagctccaggctaccttgacactcactggactgcag
tcgcttcctgttggctgccccactttcactgtagcccttctccaaccccttctgaacaca
gggcctggaaaaaaaagagctgataaaaatacagttaaaccttacacaagttccagcggt
gaagaagaagaagaaaagctacctagaagagagagtttgagaccaaagaggaaacggacc
agagatgttatcaatgaggatgacccaatacctgaaccagaggatgaagaaacaaggaag
gcaagagaaaaagaaagaaggaggaggttgaaaagaggagcggaagaagaagaggaaatt
gatgcagaggaattggaaagactgaaggcagagttagatgaaaagagacaaataattgcg
acagttaaatgcaaaccttggaagatggagaagaaaattgaagttctcaaagcacatgtg
agaggaacagaaccagatggaatgactccactgagtggtgagaaatgggcaaaattcctt
cgtgattttgagaacttcaaggctgcttgtatcccatgggaaaataaaatcaaggcgatt
gaaagtcagtttggctcatcagtggcctcctacttccttttcttgagatggatgtacgga
gtaaatatggttctttttatcctgacattcagcctgatcatgttgccagagtacctctgg
ggtttgccatatggaagtttacctaggaaaacagtcccaagagctgaagaggcatctgca
gccaactttggtgtgttgtacgacttcaatggtttggcacaatattccgtcctcttttat
ggctattacgacaataaacgaacgattggatggatgaatttcaggttgccgctctcctat
tttctggtggggattatgtgcatcggatacagctttctggttgtcctcagggcgatgacc
aaaaatattggtgacgatggagggggcgatgacaacactttcaacttcagctggaagatg
ttctgcagctgggactacctgattggcaaccctgaaacagccgacaacaaatttaattcc
atcacaatgaactttagggaagctataacagaagaaagagcagcccaagtagaagaaaat
gtccacttgatcagattcctgaggtttcttgctaacttcttcgtgttcctaacacttggt
gcaagcggatacctcatcttttgggctgtgaagagatcccaggaatttgcacagcaagat
cctgacacccttgggtggtgggaaaaaaatgaaatgaatatggttatgtccctcctgggg
atgttctgtccaacactgtttgacttatttgctgaattggaagactaccatcctctcatc
gctctgaaatggctgctgggacgcatttttgctctccttttaggcaacctgtatgtattt
attcttgccttaatggatgagattaacaacaagattgaagaggagaagcttgtgaaggcc
aacatcaccctgtgggaagccaacatgatcaaggcctacaatgcatccctctctgagaat
accactgggctaccattttttgttcatcctgcagatgtacctcgaggtccgtgctgggaa
accatggtgggacaggaattcgtgcgactgaccgtttctgatgttctgacgacttatgtc
acaattctcatcggtgactttctcagggcatgttttgtaaggttttgcaattactgctgg
tgctgggatttggaatatggatatccttcctacaccgaatttgacatcagtggcaacgtc
ctggctctgatcttcaaccaaggcatgatctggatgggttccttctttgctcccagcctt
ccgggcatcaatatccttcgactccacacatctatgtacttccagtgctgggccgtgatg
tgctgcaatgttcctgaagccagggttttcaaagcttccagatcaaataatttctacctg
ggcatgcttttgctcatcctcttcctgtccaccatgccggtcctgtacatgatcgtatct
ctcccaccatcttttgattgtggtcccttcagtggcaaaaacaggatgttcgaagtcatt
ggtgagaccctggagaatgatttcccaagctggatggcaaagattttgagacagctttcc
aaccctggactggtcattgctgttgttctagtgatgggtttgaccatctattatctcaat
gccactgccaagggccagaaggtagcaaatctggaactaaaaaagaagatgaaactgcaa
gctttggaaaacaaaatgcggaacaagaagatggcagctgcacgtgcagctgtagctgct
ggtggccagtaa
DBGET
integrated database retrieval system
