Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101976836
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Entry
101976836 CDS
T10664
Symbol
Dennd4b
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101976836 (Dennd4b)
Membrane trafficking [BR:
iti04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
101976836 (Dennd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
SPA
Motif
Other DBs
NCBI-GeneID:
101976836
NCBI-ProteinID:
XP_005331329
UniProt:
I3MFQ8
LinkDB
All DBs
Position
Unknown
AA seq
1506 aa
AA seq
DB search
MEADAVSEGGAMAEERPPRLVDYFVVAGLAGNGAPIPEETWVPEPSGPLRPSRPAEPITD
VAVIARALGEEVPQGYTCIQASAGGHPLEFSAGLLGGTQPVICYRRGRDKPPLVELGVLY
EGKERPKPGFQVLDTTPYSHSANLAPPGPGHPRTYLTYRRAAEGAGLHALGITDLCLVLP
SKGEGTPHTYCRLPRNLNPGMWGPAVYLCYKVGLAKANTLVYEAELLGRYPEEDNEAFPL
PESVPVFCLPMGATIECWPSQTKYPVPVFSTFVLTGAAGDKVYGAALQFYEAFPRARLSE
RQARALGLLSAVERGRALGGRAVRSRRAIAVLSHWPAFPAFRAFLTFLYRYSVSGPHRLP
LEAHISHFIHNVPFPSPQRPRILVQMSPYDNLLLCQPVSSPLPLSGASFLQLLQSLGPEL
AVTLLMAVLTEHKLLVHSLRPDLLTSVCEALVSMIFPLHWQCPYIPLCPLVLADVLSAPV
PFIVGIHSSYFDLHDPPADVICVDLDTNTLFQTEEKKLLSPRTLPRRPYKVLLATLTTLY
QQLDQTYTGPEEEASLEFLLTDYEAVCGRRARLEREVQGAFLRFMACLLKGYRDFLRPLT
QAPSEGSRDVDNLFYLQGFLKSRERSSHKLYSQLLHTQMFSQFIEECSFGSARHAALEFF
DSCVDKVHPEQEKAEPAPLVELEELSGSELTVFITPPEEPPAPEGSESTPQYCYDGFPEL
RAELFESPQEQPGALPVPGPSRSAPSSPAPRRTKQEMKVAQRMAQKSATVPELWARCLLG
HCYGLWFLCLPAYVRSAPSRVRALHTAYHVLREMESRKVVLPDEVCYRVLMQLCSYYGQP
VLSVRVMLEMRRAGIVPNTITYGYYNKAVLESKWPSGTPGGRLRWAKLRNVVLGAAQFRQ
PLRDRQRQQQQQQQQQQVSAHQEAGSSQTESYLERPSPTRPLQRQTTWAGRSLRDPASPT
GRLVKSGSLGSARGAQPTVEAGVAHMIEALGVLEPRGSPVPWHDGSLSDLSLTGEELAPG
GSPGGSGLALSAQSTEALEGLSVRGPKASGRQDEAGTPRRGLGARLQQLLTPSRRSPAAR
ISPSEMPPDLPPPARRSPMESLLRPRERPGSTASESSASLGSEWDLSESSLSSLSLRRSS
ERLSDTPGSLQPPSLEILLSSCSLCRACDSLVYDEEIMAGWAPDDSNLNTTCPFCACPFV
PLLSVQTLDSRPSAPSPTPAPAGASSSKDAPVPGGPGPVLSDRRLCLALDEPQLCNGHTG
GASRRVESGAWAYLSPLVLRKELESLVENEGSEVLALPELPAAHPIIFWNLLWYFQRLRL
PSILPGLVLASCDGPPPPQLPQAPSPWLTPDPASVQVRLLWDILTPDPSSCPPLYVLWRV
HSQIPQRVVWPGPVPACLSLALLESVLRHVGLNEVHKAVGLLLETLGPPPAGLHLQRGIY
REILFLTMAAMGKDHVDIVAFDKKYKSAFNKLASSMGKEELRQRRAQMPTTKAIDCRKCF
GAPLEC
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagatgcagtgagtgaggggggggccatggcggaggagcggcccccccggctg
gtggattacttcgtggttgctgggcttgcggggaatggagcacctatccctgaggaaaca
tgggttcctgagcccagcggacccctgcgcccttcccggccagctgagcccatcaccgat
gtggcagtcattgctagggcactgggcgaggaggtgccccagggctatacatgcatccag
gcttctgctgggggccaccccttggaattcagtgctgggctcctgggtggaactcagcct
gtcatctgctaccgcagaggccgggacaaacccccgcttgtggagttgggggtgttatat
gagggcaaggaacgtcccaagcctggcttccaagtgcttgatactacaccgtacagccac
tcagccaacctggcccctccaggccccgggcatccccgcacctacctcacttataggcgg
gcagcagagggggcaggactgcatgccctgggcatcactgacctctgcctggtgctgccc
agcaagggtgagggcacgcctcatacttactgccggttgccccgcaacctcaaccctggc
atgtggggcccagcagtgtacctgtgctacaaggtgggcctagccaaagccaacacactg
gtgtatgaggcagagctgctgggccgctatccagaggaggacaatgaggctttcccgctg
cccgagtcagtgccagtcttctgcctgcccatgggggccactatcgagtgctggccttcc
cagaccaagtaccccgtgcccgtcttctccacctttgtgctcacgggtgccgctggtgat
aaggtgtatggtgccgccctgcagttctatgaggcctttccgagggccaggctgtcagag
aggcaggcgcgggcactgggcctgttgagcgccgtggaacggggccgggcgctgggcggc
cgtgccgtgcgcagccggcgggccatcgccgtgctgtcccactggcctgcctttccagcc
ttcagagccttcctcaccttcctttaccgctactctgtctcgggcccccaccgcctgccc
ttggaagcgcacatctcccacttcattcacaacgtgcccttcccttccccacagagaccc
cgcatcttagtgcagatgtctccctatgacaacctgctcctctgtcagcctgtgtcctca
ccattgcccctcagcggcgccagcttcctgcagctgctgcagagcctgggccctgagctg
gcggtcacgctgctgatggctgtgctcacagagcacaagttgctggtccactcgctgagg
ccggacctgctcacgagtgtctgtgaggccctcgtctcgatgatcttcccgctgcactgg
cagtgcccctacattccgctgtgccctctggtgctggcagacgtgctgagcgcccccgtg
cccttcatcgtgggcatccactccagctactttgatctgcatgaccctcctgccgacgtc
atctgtgtcgacctcgataccaacacgctcttccagacagaggaaaagaagctcctctcc
cctcggaccctgccccgcagaccctacaaagttctgctggccacactaacaaccctgtac
cagcagctggaccagacgtacactggacctgaggaggaggcatccctggaattcctgttg
acggactatgaggccgtctgcggccgccgcgcccgcctggagcgggaagtccagggagcc
ttcctgcgcttcatggcctgcctgctcaagggctaccgggacttcctgcgccccctcacc
caggccccttctgaggggtctcgtgacgttgacaaccttttctatcttcagggtttcctc
aagtcccgagaacgctccagccacaagctgtactctcagctgctgcacacgcagatgttc
tcacagttcatcgaagaatgttcttttggctctgctcggcatgctgcccttgagttcttt
gactcttgtgttgacaaggtccaccccgagcaggagaaggccgagccggcgcccttagtg
gagctggaagaactctcgggaagcgagctcaccgtcttcatcaccccccctgaggagccc
cccgccccagagggcagtgaatccactccccagtactgctacgacgggttcccagaatta
cgggctgagctatttgagtctcctcaagagcaaccaggggccctgcctgtgccaggccca
tcccgtagtgcccccagcagtcctgcccctcgccgtaccaaacaggaaatgaaggtggcc
cagcggatggcacagaagtcagcgacagtgcccgagctgtgggcccggtgcctgctgggc
cactgctacgggctgtggttcctgtgtcttccggcctatgtgcggtcagcaccctcccgg
gtgcgggcgctgcacacagcctaccatgtgctgcgcgagatggagagccgcaaggtggtg
ctccccgatgaggtgtgttaccgggtgctgatgcagctctgctcctactacgggcagccc
gtcttgtctgtgcgggtcatgctggagatgcgacgggcaggcatcgtgcccaacaccatc
acctatggttactacaataaggctgtgctggaaagcaagtggccatctggtacaccaggt
ggacgcttgcgttgggccaagcttcggaatgttgtcctgggggctgctcaattccgtcag
cctctgagagaccggcagcggcagcagcagcagcagcagcagcagcagcaggtgtcagca
caccaagaggctggcagttcccagacagagtcctacctggaacgcccttccccaacccgt
ccccttcagcgccagacgacttgggctgggcgaagtctgagggacccggcctcacccact
gggcgcctggtgaagagtggcagtttgggcagtgcccgaggagcccagcccactgtagag
gccggtgtggcccacatgatagaggctttaggggtcctggagccccggggatcacctgtg
ccctggcatgatggaagtctctcagacctgagcctgacaggggaggagctggcacctgga
ggcagtccaggcggctcaggcttggccctgagtgcccagtccactgaggccctggaaggg
ctgagtgtgcgagggcccaaggctagtgggcgtcaggatgaggcaggcaccccccggcga
gggctgggtgcccgcctccagcagctgctcactccttcccgccgctcccctgctgcccgc
atttccccatcagagatgccccctgacctgcctccccctgcccgtcgcagcccaatggag
agtcttctgaggccccgggagcgacctggatccactgcatcggagagctcagcctctctg
ggcagtgagtgggacctctcagagtcttctctcagtagcctgagcctccgccgttcctca
gagcgcctcagtgacacccctggatccctccagccaccttccctggaaattctgctctcc
agctgctccctgtgccgtgcctgtgactcactggtgtacgatgaggaaatcatggctggt
tgggcacccgacgactctaacctcaacacaacctgccccttctgcgcctgcccttttgtg
cccttgctcagtgttcagacccttgattcccgacccagtgcccccagccccacccctgcc
cctgctggtgccagtagcagcaaagacgcccctgttcctgggggtcctggccctgtgctc
agcgaccgcaggctctgtctcgccctggatgaacctcagctctgcaacgggcacacaggg
ggcgcctctaggcgcgtggagagtggggcctgggcatacctgagtcccctggtgctgcgg
aaggagctggagtctctggtagagaatgagggcagcgaggttctggcactgcctgaactg
cctgctgcccaccccatcatcttctggaaccttctgtggtatttccaacggctacgcctg
cctagtattctaccaggcctggtgctggcctcctgtgatgggcccccgcctccccagctc
ccccaggccccgtctccttggctaacgcctgatccagcctctgtgcaggtgcgactgctg
tgggatatcctgactcctgaccctagcagctgcccacctctctatgtgctctggagggtc
cacagccagatccctcagcgggtggtgtggccaggccccgtacctgcgtgtctcagcttg
gcattgctggagtcagtgctgcgccatgttgggctcaatgaggtgcacaaggctgtgggg
ctcttgctggagactctagggccccctcctgctggcctgcacctgcagaggggtatctac
cgcgagatcttattcctgacaatggctgccatgggcaaggaccacgtggacatagtggcc
ttcgacaagaagtacaaatccgccttcaacaagctggccagcagcatgggcaaggaggaa
ctgaggcagcggcgggcacagatgcccactaccaaggccattgattgccgaaaatgtttt
ggagcacctctggaatgctag
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integrated database retrieval system
