Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101976976
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Entry
101976976 CDS
T10664
Symbol
Whrn
Name
(RefSeq) whirlin
KO
K21879
whirlin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
iti03037
]
101976976 (Whrn)
Cilium and associated proteins [BR:
iti03037
]
Primary cilia and associated proteins
USH complex and associated proteins
101976976 (Whrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PAH_ZNF598
DUF1722
Motif
Other DBs
NCBI-GeneID:
101976976
NCBI-ProteinID:
XP_013212105
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MLRLVIPRSDQLLFDQYTAEGLYLPATTPYRQSAWGGPDGAGPGEVRLVSLRRAKAHEGL
GFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKALKGSK
KLVLSVYSAGRIPGGYVTNHIYTWVDPQGRSTSPPSGLPNPQGSSALRQPEGDRRSGFCL
LQGGDEKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAESSGLKVGDQILEANG
RSFLTILHDEAVKLLKSSRHLILTVKDVGRLPHARTTVDETKWIASSRIGESATNSAGFP
GDVTTEGTNKPGFYKGPAGSQVTLSSLGNQTRVLLEEQARHLLSEQERATMTYYLDEYRR
GSVSVEALVMALFELLNTHAKFAVLSEVRGTISPQDLDRFDHLVLRREIESMKARQPPGP
GAGDTYSLVSYSDTGSSTGSHGTSTTVSSARNTLDLEESGQAVQGGVNTLPDVSVDDVKP
SSEELPHTKLPPPPPLLGQGPGQDRPPSQPRKPAREDPQPPSSASSHSGIIFSAPQTCSP
PLAAAPSPGPPSTQDSPSSPIYASVSPAKPSSKRPLDAHLALVTQQPIGPFPRVQSPPHL
RSPSAEAPGAGGCLPPPSPSDPLDQPNQHFVLVEVHRPDSEPDVNEVRALPQTRTASTLS
QLSDSGQTLSEDSGVDAGELEASAPGRGRQMASTKNKSSKELPQTERATEGATKPPGLLE
PTSTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLT
LRGKEHREAARIIAEAFKTKDRDYIDFLVTEFNVML
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtctggtcatcccgcgctcagaccagctgctcttcgaccagtacacggctgag
ggtctctacctgcctgccaccaccccctacaggcaatctgcttggggcggccccgacggc
gcagggcctggggaggtgcgcctggtcagcctaaggcgcgctaaggcccacgaaggcttg
ggcttcagtatccgagggggctcagaacacggcgtgggtatctacgtttccttggtggag
cctggttccctggctgagaaagaagggctgcgggtcggggaccagattctgcgcgtcaac
gataaatccctagcccgggtgacccacgcagaggcagtcaaggctctgaagggctccaag
aagctggtactgtctgtgtactctgcggggcgcatccctggaggctatgtcaccaaccac
atctacacctgggtggacccacagggccgcagcacctccccgccctcaggcctgcccaac
ccccagggcagcagcgctctgagacagcccgagggtgaccggaggagcggcttctgcctc
ctgcaaggcggggatgagaaaaaggtgaacctggtgctgggggatggccgctccctgggc
ctcaccatccgcgggggcgccgagtacggcctgggcatttacatcacgggtgtggacccc
ggctcggaagcggaaagcagcgggctcaaggttggggaccagatcctggaggccaacggg
cggagcttcctcaccatcctgcacgacgaggcggtcaagctgctcaagtcgtctcggcac
ctcatcttgaccgtgaaggacgtcgggaggctgccgcacgcccgcaccacggtggacgag
accaagtggatcgccagttcccggattggggagagcgccaccaactcggcagggtttcca
ggggatgtcacaacagaagggaccaacaagccaggattctataagggcccagccggctcc
caggtgacgctgagcagcctggggaaccagacccgagtgctgctggaggaacaggcccgg
cacctgctgtcggagcaggagcgcgccaccatgacctactacctggacgagtaccgccgc
ggcagcgtctccgtggaggccctcgtgatggccctgttcgagctgctcaacacccacgcc
aagtttgctgtcctctctgaggtaagaggcaccatctccccacaagacctggaccgcttt
gaccacctggtgctgaggcgggagatcgagtccatgaaggcacgtcagccgccgggccct
ggggccggggacacctactccctggtgtcctacagcgacacgggctcgtccacaggcagc
cacggcacctccaccaccgtcagctcggccaggaacaccctggacctggaggagtcgggc
caggccgtccagggcggcgtcaacacgctccccgacgtgtccgtggacgatgtcaagccc
agctccgaggagctgccccacaccaagctgccgcctccccctccgcttctgggccaaggc
ccaggccaggaccgcccgcccagccagccgaggaagcccgccagggaggacccccagccc
ccctcctccgcctcctcgcactcaggcatcattttctccgcaccccagacctgcagcccg
ccgctggccgccgcaccctccccagggcccccctccacccaggactcgccctcctccccc
atctacgcctccgtctccccggccaaacccagctccaagaggccactggatgcccacctg
gccctggtcacccagcagcccatcggccccttccctcgggtccagtcgcccccacacctg
aggagcccctcggcagaagccccaggagctgggggctgcctcccgccgccctcgccctcc
gaccccctggaccagccgaaccaacacttcgtcctggtggaggtgcaccggcccgacagc
gagcccgacgtgaacgaagtgcgggccctgccccagacacgcacagcctccacgctctcc
cagctctcggacagtgggcagactcttagtgaggacagtggcgtggatgccggagagctg
gaggccagtgccccaggcagaggcagacagatggcttccaccaagaacaagagtagcaag
gagctgccgcagacggagagagccaccgagggggccaccaagccgcctggactcctggag
cctacgtctacgctggtccgcgtgaagaaaagtgcagctaccctgggcatcgccatcgag
ggtggcgccaacacacgccagcccctgcctaggattgtcaccattcagcgaggcggctcg
gcccacaactgtgggcagctcaaggtgggccacgtgatcctggaagtgaacgggctgacg
ctccggggcaaggagcatcgggaggctgcccgcatcatcgctgaggccttcaagaccaag
gaccgtgactacatcgacttcctggtcaccgaattcaatgtgatgctctag
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