Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101977023
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Entry
101977023 CDS
T10664
Symbol
Sema6b
Name
(RefSeq) semaphorin-6B
KO
K06842
semaphorin 6
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101977023 (Sema6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Squash
Motif
Other DBs
NCBI-GeneID:
101977023
NCBI-ProteinID:
XP_040146962
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MTSAGSAGVTSRHLALAMRTAGAPPPGPALMLLLLLLGDSQGLFPEEPPPLSVAPRDYLS
HYPVFVGGGPGRASPAEDTEDLNIQRVLRVNRTLFIGDRDNLYRVELEPPTSTELRYQRK
LTWRSNPSDIDVCRMKGKQEGECRNFVKVLLLRDESTLFVCGSNAFNPVCANYSMDTLQP
LGDNISGMARCPYDPKHANVALFSDGMLFTATVTDFLAIDAVIYRSLGDRPTLRTVKHDS
KWFKEPYFVHAVDWGSHVYFFFREIAMEFNYLEKVVVARVARVCKNDVGGSPRVLEKQWT
SFLKARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQ
VAAVFEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGTQYNASSALPDEILSFVKTHP
LMDETVPSLGHAPWIVRTLMRHPLTRVAVDVGAGPWGNQTVVFLGSEVGTVLKFLVRPST
RLSGPAGPSVFLEEFETYRPDRCGRPGGAETGQRLLSLELDAASGGLLAAFPHCVVRVPV
ARCQQFSGCMKNCVGSQDPYCGWTPEGSCVFLSPGTRATFEQDVSGASTSGLGDCTGLLR
ASLSEERAGLVSVNLLVTSSVAAFVVGAVVSGFSVGWFVGLRERRDVRHLYSPPPLGPED
PTLAGPEAQSGDQSPVVSQV
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagcgggcagtgcaggtgtcacctcccgccacctggcactcgccatgcggacc
gcgggggcgcctcctcccggcccggccctgatgctcttgctgctgctactgggggactcc
cagggcctcttccccgaggaaccgcctccgctcagcgtggcccccagggactacctgagc
cactaccccgtgttcgtgggcggggggcctgggcgcgcgagccccgcggaggacaccgaa
gacctcaacatccagcgcgtgctgcgggtcaacaggacgctgttcatcggcgacagggac
aacctgtacagggtggagctggagccgcccacgtccaccgagctgcggtaccagcggaag
ctgacctggcgctccaaccccagcgacatagacgtgtgtcggatgaagggcaagcaggag
ggcgagtgtcgcaacttcgtaaaggtgctgctgctccgcgacgagtccacgctcttcgtg
tgcggctccaacgccttcaaccccgtgtgcgccaactacagtatggacacgctgcagcct
cttggggacaacatcagtggcatggcccgctgcccatatgaccccaaacatgccaatgtc
gccctcttctcagatgggatgctcttcacagccactgtgaccgacttcctagccattgac
gctgtcatctaccgcagccttggggaccggcccaccctgcgcaccgtgaagcacgactcc
aagtggttcaaagagccgtacttcgtgcacgcggtggactggggcagccacgtctacttc
ttcttccgggagatcgccatggagtttaactacctggagaaggtggtggtggcccgcgtg
gcccgcgtgtgcaagaacgacgtggggggctccccgcgcgtgctggagaagcagtggacg
tccttcctgaaggcgcggctcaactgctcggtgcccggggactcccacttctacttcaac
gtgctgcaggccgtcacgggcgtggtcagcctggggggccggcccgtggtcctggccgtc
ttctccacccccagcaacagcatccccggctcggccgtctgcgccttcgacatgacccag
gtggccgccgtgtttgagggccgctttcgcgagcagaagtcccccgagtccatctggaca
ccagtgcccgaggatcaggtgccgcggccccggcccgggtgctgcgcggccccgggcacg
cagtacaacgcgtccagcgccctgcccgacgagatcctcagcttcgtcaagacccacccg
ctgatggacgagacggtgccctcgctgggccacgcaccctggatcgtgcggaccctgatg
cggcacccgctgactcgcgtggctgtggacgtgggcgctggcccctggggcaaccagacg
gtggtcttcctgggctccgaggtgggtactgtcctcaagttcctcgtccggcccagcacc
aggctctcgggtcctgctgggcccagcgtcttcctggaggagtttgagacctaccggccg
gacaggtgtggacggcccggcggtgctgagacagggcagcggctgctgagcctggagctg
gacgcagcctcaggtggcctgctggcggcctttccccactgcgtggtccgtgtacctgtg
gcccgctgccagcagttctcggggtgcatgaagaactgtgtcggcagccaggacccctac
tgtgggtggacccctgagggctcctgcgtcttcctcagccctggcaccagagccaccttc
gagcaggatgtgtccggggccagcacctcaggcttaggggactgcacaggcctcctgcga
gccagcctctcggaggagcgtgccgggctggtgtccgtgaacctgctggtgacctcgtcg
gtggcggccttcgtggtgggcgccgtggtgtccggcttcagcgtgggctggttcgtgggc
ctgcgcgagcggcgggatgtgcgccacctgtacagcccacccccactggggcccgaggac
cctacccttgcaggacccgaagcccagtctggggaccagtcgcctgtggtgagccaggtc
tga
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