Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101977060
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Entry
101977060 CDS
T10664
Symbol
Apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iti03400
]
101977060 (Apex2)
Enzymes [BR:
iti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
101977060 (Apex2)
DNA repair and recombination proteins [BR:
iti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
101977060 (Apex2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
101977060
NCBI-ProteinID:
XP_005339853
UniProt:
I3NB59
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Position
X
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AA seq
518 aa
AA seq
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MLRIVSWNINGIRSPLQGVVCQETSNSTSMAMRRILDELDADIVCLQETKVTRDVLTEPL
AIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGLFATQNPDVGCYGNTDEFT
QEELRALDSEGRALLTQHKIRTWKGKERTLTLINVYCPHADPGKPERLTFKMRFYRLLQI
RAEALLAAGSHVIILGDLNTAHRRIDHCDAVNLECFEEDPGRKWMDGLLSNLGCQAGSHG
GPFIDSYRYFQPKQERAFTCWSVVSGARHLNYGSRLDYVLGDRTLVIDTFQNSFLLPEVM
GSDHCPVGATLNVSSVPAKQCPPLCTRFLPEFAGTQLKILRFLVPREQEPVLEKSALRLS
NQTQVPKQQNKVRVRSTRPRPSQANSRRGQTNLMNYFQPSSSHSKTSPELELLSLPLVNN
LTTPKTLEEEVIAREVEGQAKHSESKEEKELRTSFWKSVLGGPSPMPLCSGHREPCVMRT
VKKQGPNLGRHFYMCARPRGPPSDPSSRCNFFLWSKPS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcattgtgagctggaacataaatggaatccgaagtcccctgcaaggggtggtg
tgccaggaaaccagcaacagtacctccatggccatgagacgcattttggatgaactggat
gctgatattgtctgtctccaggagaccaaagtgactagggatgtgctgacagagcccctg
gctatcgttgagggctataactcctatttcagcttcagccgcagccgaagtggctattct
ggtgtagctaccttctgtaaggatagcgctaccccagtggctgctgaagaaggcctgagt
ggcttatttgccacccagaatccagacgtgggttgttacggaaacacagatgagttcaca
caagaggagctcagagctctggatagtgagggccgggccctccttacacagcacaagatc
cgcacttggaaaggaaaagagaggacattgacccttatcaacgtgtactgcccccacgca
gaccctgggaagcctgagcggctgacctttaagatgcgcttctatcgtttgctgcagatc
cgagcagaagccctcttggcagctggcagccatgtgatcattttgggtgacctgaataca
gcccaccgccgcatcgaccactgtgatgcagtcaacctggaatgctttgaagaggaccca
ggacgcaaatggatggacggcttactcagtaacctggggtgccaggctggatcccatgga
gggcccttcattgatagctaccgctatttccaaccaaagcaggagagggccttcacctgc
tggtccgtggttagtggtgcccgacatctcaactatggttctaggcttgactatgtgctg
ggggataggaccctggtaatagataccttccagaactccttcctgctacctgaggtgatg
ggctctgaccactgccctgtgggtgccaccttgaatgtgtcctctgtgcctgcaaaacag
tgccctcctctgtgcacccgctttctccctgagtttgcaggtacccagctcaagattctc
cgcttcctagttcctcgtgaacaagaacctgtgttggaaaagtcagcgctgcggctcagc
aatcaaacacaggtaccgaagcagcaaaacaaagtccgtgtgcgctcaaccaggcctcgg
ccaagtcaggctaattccagaagaggccagacaaatctgatgaactacttccagccctcc
tccagccattccaaaacttctcctgaattggagctgcttagcttgcctctggtgaacaac
ctcacaaccccaaagacactagaagaggaggtgatagccagagaggtagaagggcaggcc
aagcactcagagagtaaagaagaaaaggagttacggacctcattctggaagtctgtgctt
gggggaccttcacccatgcccctctgcagtggccacagggaaccatgtgtgatgcgaact
gtaaaaaagcaaggacccaacctgggccgccacttttacatgtgtgccaggccccggggt
cctcccagtgacccttcctcccgctgcaacttctttctctggagcaagcccagctga
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