Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101977202
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Entry
101977202 CDS
T10664
Name
(RefSeq) LOW QUALITY PROTEIN: thyroid receptor-interacting protein 11-like
KO
K23368
thyroid receptor-interacting protein 11
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101977202
Membrane trafficking [BR:
iti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
101977202
Retrieval pathways
101977202
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
101977202
NCBI-ProteinID:
XP_040145790
LinkDB
All DBs
Position
Unknown
AA seq
1353 aa
AA seq
DB search
MRGDCATGCQSLVKDHDRPLLLPAEQDSWCWRSPAILGILSSCWSQRLRTFWGEKWMVLD
AVLELVRWLTKVAAMSSWFGGLGSGLGNFLGQVGSSLPSLTDHVCNFTRGMLLDDIGDIA
AGLPDCRRKEMEASNSPLRSENERLQKYCTDLEEKHEASELQINPQCPSYGNQLQQKEVE
ISHLKGRQMALQDQVFNLQEAAQWVGSGACGVPTTTALGPFGSQISSDFSAFSDDDKDFS
DLISSHQEINRLSIEVSRLESKVGHSRHVAEAQGTQNSDPSEIFKLQNTIKTLEXNPSPD
IDDHQHEVSVLEQSATVAEKGTILPQNSSSMEEVLRLQRALSDAEKEIMRLNDFNQDQSL
AEDNLKLKMHVEALEKEKSSLSQEKEELQITLSKLSCDSQVIKNTASTDMNVSVQLHDLK
LHLKAKEEELNQSIHEKKMLIAELEELDHQNQEATKHMILIKDELSKQEKEGDLVIQKLK
QDLDDEKKRVHQLEDDKMNLSKELHVQKEKLXSAQSLIDLHLTKQKLEDKVEDLVDQLNK
SQQSSLXXXXXXXXXXXXXXXXXXELSGCQSKFRSSLNEDSSSNVKDDLLQEREAEVSNL
RQNLSEVEELNENLKKVAVDLKRENEMFILACKDVRRKLEASIAANNQVSQEKDTVKETL
IRDKEEIESELQQAEKRLLEEAKNHRQTIQELSNACHLNTSAFQLKPDCVVQLKQEKDFE
IAGLKKNIEPMTTDPKETEEILEPHVEEQKQLIQLIKEKEVFIEKLKEKCSELQKDLDEC
SQALRENETLRQTIEEKDRSLGSMTAENNHLQEELESLKEQQNRAVPVAEPKTLDGIPEV
ESEVYQLKIVKNHLENEIKHHQKIITNQNKRKMRLLQSLQEQKKEMDDLKHQHEQLNAAH
IQLILEKDEEIKNLQKTIEQIKSQLPGERLDAQTENSDIFQETNVKSLNRESGSEQCDLW
NEKKLLKQTVIYLKGRILIFEVDFSKLKGENEKLRVASKEKEREYQALQETNSKFSVRLG
EKELECESMKDKALAFEQLLQEKSQLSNAVASMQEKTVIFQQERDQVIVALKQVQMENST
LQHEVQQFPDKELRLNRELERLRSHLLESEESYTQDILAAEDHEIKLKKEVTLLEEKLVS
SSKASHQASVQIESLQEQLRLVCKRREALQLMGSILDIPKEEMEQLLSEDSGGVTKWMTS
WLGGASKSVPNIPLTPNQQPVFNSSFSELFVKFLEMESHPSVPPPKLSAHAMDCPDSPGR
REQGGNVPGSVKDAAKFRGGQSTNRNPFLVPRSAAVPLSNLAGVGLGGPGHPLFKPITDF
MPTFTPLPVSPDNSATVVLEHLLKQRQSHPEMI
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtgactgtgccactggctgccagtccctggtcaaagaccatgacaggcctctg
cttttaccggcagaacaagacagttggtgttggcggagccccgcgattctcggaattctg
agctcttgctggagtcaacgtttgaggacgttctggggagagaagtggatggtgctggac
gcggttttggagctggtccgctggctcactaaagtggcggcgatgtcgtcctggtttgga
ggcctgggctcaggcttgggcaacttcttgggtcaggtgggaagcagcttgccttccctc
accgaccatgtatgcaacttcaccaggggaatgcttctggatgacataggagacatagca
gcaggtttacctgattgtcggagaaaggaaatggaagctagtaattctccactaagatcg
gagaatgaaagacttcaaaagtattgtactgatctggaggaaaaacatgaagcatcagaa
ctgcaaataaatcctcagtgtccaagttatggaaatcaactgcaacagaaggaggtagag
atcagccatctgaaaggtagacagatggcactgcaagatcaagtgttcaacctccaggaa
gctgctcaatgggtaggttcaggagcttgtggtgtaccaacaaccactgcactgggtcca
ttcggttcccagatcagtagtgatttttcagccttttctgatgatgacaaggactttagt
gacctaatttcgtcccaccaagaaataaacagattgtcaattgaagtttcgagacttgaa
tctaaagttggccattcgaggcatgttgctgaggctcagggaacacagaattctgacccc
agtgaaatcttcaaactgcaaaatactatcaagactcttgaatgaaacccaagtccagac
atagatgatcatcagcatgaagtgtcagttttggagcagagtgctactgtggcagaaaag
ggaacaatccttccacaaaattcttcatcaatggaagaagtgttgaggctacaacgagca
ctgtctgatgctgaaaaggaaataatgagactaaatgatttcaaccaggaccagagcctt
gctgaagacaatctgaaacttaaaatgcatgtggaagctttagaaaaagagaagtcatca
ttgagtcaagaaaaggaggaacttcagataacactgtcaaaattgagctgtgactctcaa
gtaattaaaaacacagcttcaacagacatgaatgtgagtgtccaattacatgacttaaaa
cttcacttgaaggcaaaggaggaagaactgaatcagagtatccatgaaaagaaaatgctg
atagctgagttagaagaactggaccatcagaatcaggaagctacaaagcacatgattttg
ataaaagatgagctatcaaaacaagaaaaagaaggagaccttgtcatccagaaattgaaa
caagatctagatgatgaaaaaaagagagttcatcaacttgaggatgataaaatgaaccta
tccaaagagttgcatgtgcagaaggagaagttanngagtgcacagagcctcattgatttg
catttaaccaagcagaagcttgaagataaagtagaagatttagtagatcagctaaataag
tcacaacaaagtagcttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnngagctgtctggatgtcagagtaagttccgaagttctctgaatgaagac
tctagcagtaatgtgaaggatgacttgcttcaagaacgggaagctgaagttagcaactta
aggcaaaatctttcagaagtagaagagctcaatgaaaatttaaagaaagttgctgttgat
ctcaaaagggagaatgaaatgttcattttagcatgtaaagatgtaagacgtaagttggaa
gcatctattgctgctaacaatcaagtgtctcaagaaaaagacactgtcaaggagactcta
ataagagacaaagaagagatagaatccgaactgcaacaggcagaaaaaagactgttggaa
gaagcaaagaatcacaggcagactattcaggaactctccaatgcatgtcatttgaatacc
tctgcctttcagctaaaacctgattgtgtagttcaactcaagcaagagaaggactttgag
atagcaggactcaaaaagaatattgaaccaatgactactgatccaaaagaaactgaggaa
attttggaacctcatgtcgaagaacagaagcaattgatacaacttataaaggagaaagaa
gtttttattgaaaaactcaaagaaaaatgttcagaactacaaaaggatttagatgagtgt
tctcaggccttaagagaaaatgaaactttaaggcaaaccatagaagaaaaggacagaagt
cttggctccatgacagcagaaaacaaccatctgcaagaagaattggagagccttaaggaa
cagcagaatcgagctgtacctgtggctgagcctaaaacccttgatggtatcccagaagta
gaatcggaggtgtatcaactgaaaatagtcaaaaatcatctggaaaatgaaattaaacac
catcaaaagataattacaaatcaaaacaagcgtaaaatgcgactccttcagtctttacag
gagcagaagaaggaaatggatgaccttaaacaccaacatgagcagctgaatgctgcgcat
atccagttaattttagaaaaagatgaggaaattaagaacttgcagaaaacgattgaacaa
ataaaatcccagttgcctggagaaagactcgatgctcaaacagagaattctgatattttt
caagaaacaaatgtaaaaagcctcaatagagaaagtggaagtgaacaatgtgacctatgg
aacgaaaagaagttgttgaagcaaacagtaatatatctaaaggggagaatattgattttc
gaagtggacttttctaaattaaaaggggaaaatgaaaaattgagagtagcatccaaagaa
aaggaaagggagtatcaagcactacaagagacaaactcaaagttctctgtgaggctggga
gaaaaagaattggagtgtgagtcaatgaaggataaagctcttgcttttgagcaactgtta
caagaaaaaagtcagctttcaaatgcagttgcatcaatgcaggagaagacagttatattt
cagcaagaacgagaccaagtcatcgtagcactaaaacaagtacagatggaaaacagtact
ctccagcacgaggttcaacagttccctgacaaagaactacgcttgaaccgggagctagaa
aggctacgcagccatctcttggaatcagaagagtcttatacccaggacattttggctgca
gaagaccacgagattaaactgaaaaaggaagtcacgcttttggaggaaaagctagtgtca
tcttctaaggcaagtcatcaagccagcgtgcagatagagtcactgcaagaacagttgagg
ttggtctgtaaacgccgagaagccttacagttaatgggaagcatcctggacattccaaag
gaggaaatggagcagttgttgagtgaagattccggtggtgttactaagtggatgactagt
tggcttggaggggcatcgaaaagtgttcccaacatacctttgacaccaaatcaacaacct
gtgtttaatagttctttttcagaactctttgtcaaatttctggaaatggaatctcatcct
tctgttccaccacccaaactctctgctcatgccatggactgtccagactcaccaggaagg
agagagcaaggtggaaatgtaccaggaagtgttaaagatgcagccaaattcagaggtggt
caaagcaccaacaggaatccattcttggttccccgttcggcagctgtgcctcttagtaac
ctagctggagttggtcttggtggacctgggcatcctctttttaaacccatcacagatttc
atgcccacctttacaccattgccagtgtccccggacaatagcgccacagttgtattagag
caccttctaaagcaaaggcaatctcatccagagatgatttaa
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