Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101977218
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Entry
101977218 CDS
T10664
Symbol
Gabpb1
Name
(RefSeq) GA-binding protein subunit beta-1 isoform X2
KO
K09454
GA-binding protein transcription factor, beta
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101977218 (Gabpb1)
03029 Mitochondrial biogenesis [BR:
iti03029
]
101977218 (Gabpb1)
Transcription factors [BR:
iti03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
101977218 (Gabpb1)
Mitochondrial biogenesis [BR:
iti03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
101977218 (Gabpb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ank_KRIT1
CCDC84
LAMTOR5
Motif
Other DBs
NCBI-GeneID:
101977218
NCBI-ProteinID:
XP_005316614
UniProt:
I3MQZ4
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggtagatttgggaaagaagcttttagaagcggcacgagcaggtcaagatgat
gaagttcgtattttgatggcaaatggagctccttttactacagactggctgggaacatct
ccacttcatctggcagcacaatatgggcattattccaccacagaggtactactgcgagct
ggtgtaagtagggatgccagaaccaaagtggaccgaacaccattacacatggcagcttct
gagggccatgccagcatagtagaggttttgcttaagcatggtgctgacgttaatgcaaag
gacatgttaaagatgacagctctgcattgggccacagaacacaatcatcaagaggtggtg
gaacttttaatcaaatatggtgctgatgtacacacgcaaagtaaattttgtaaaactgca
tttgatatttcaatagacaatggaaatgaagatttagcagaaatattacagattgctatg
cagaaccaaatcaacacaaacccagagagtcctgacactgtgacgatacatgctgcaaca
ccacagtttatcattggacctggaggggtggtgaacctaacaggtctggtatcttcagaa
aattcatccaaggcaacagatgaaacgggtgtgtctgctgttcagtttggaaactcctct
acatcagtattagctacgttagctgccttagctgaagcctctgctccgttatccaattca
tcagaaactccagtagtggccacagaagaagtggttactgcagaatctgtggatggtgca
attcagcaagtagttagttcagggggtcaacaagtcatcacaatagtcacagatggaatt
cagcttggaaatttgcactccattccaaccagtggaataggtcagcccatcattgtgacc
atgccagatggacagcaagtgttaacagtaccagcaacagacattgctgaagaaactgta
ataagtgaagaaccaccagctaagagacaatgtatcgaaataattgaaaaccgggtggaa
tctgcagaaatagaagagagagaagctcttcagaaacagctggatgaagcaaatcgagaa
gcacaaaaatatcgacagcagcttcttaagaaagaacaggaagccgaggcttacagacag
aaattagaagctatgactcgtcttcagactaataaagaagctgtttag
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