KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101977462
Entry
101977462         CDS       T10664                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101977462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:iti03041]
    101977462
Spliceosome [BR:iti03041]
 Complex A
  U2 snRNP components
   U2 related factors
    101977462
 Complex B
    101977462
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7
Other DBs
NCBI-GeneID: 101977462
NCBI-ProteinID: XP_005328099
LinkDB
Position
Unknown
AA seq 1029 aa
MADKTPGGSQKASSKTRSSDVHSSGSSDAHMDASGPSDSDMPSRTRPKSPRKHNYRNESA
RENLCDSPHQNLSRPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEF
LAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPP
SLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDG
QRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPL
ASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPP
HPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVV
IPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSI
LQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRD
KLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSD
VLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDW
AIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATP
IDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWE
LFDQHEESEEEENQNQEEESEDEDDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEK
RAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKK
DKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERS
HKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRS
HKKSKKNKH
NT seq 3090 nt   +upstreamnt  +downstreamnt
atggcggacaaaacgccaggcggatctcagaaggccagttcaaagaccagatcatcagat
gttcattcatctggctcttcagatgcacatatggatgcatctggaccctcagatagtgat
atgccaagtcggactcggcctaagagtccaagaaaacataattataggaatgaaagtgcc
cgtgagaacctttgtgattctcctcatcagaatctctcaagacctcttctagaaaacaaa
cttaaagcattcagcattggaaaaatgagcacagctaagcgaactttaagtaagaaggaa
caagaggaattaaagaaaaaggaggatgaaaaggcagctgcagagatctatgaggaattt
cttgctgcttttgaaggaagtgatggtaataaagtgaaaacatttgtgcgagggggtgtt
gttaatgcagctaaagaagaacatgaaacagatgaaaaaagaggtaaaatctataagcca
tcttcaagatttgcagatcaaaaaaatcctccaaatcagtcgtccaatgaaagaccacca
tctcttcttgtaatagaaaccaaaaaacctccactgaagaaaggggagaaagaaaagaaa
aaaagcaacttggaacttttcaaagaagaattaaaacaaattcaagaagagcgtgatgag
aggcataaaacaaaaggcaggttaagtcgattcgagccgcctcagtccgattctgatggt
cagcgtcgttctatggacgcgccttccaggagaaatcgatcatctggtgttcttgatgat
tatgcaccaggctcacatgatgtaggcgatccgagtactactaatttataccttggaaac
attaatccacagatgaatgaagaaatgctgtgccaagaatttggaagatttggaccatta
gctagtgtgaaaattatgtggcctagaactgatgaagaaagagcaagagaaagaaattgt
ggctttgtggcctttatgaatagaagagatgctgaaagagctttaaaaaatttaaatgga
aaaatgattatgtcttttgaaatgaagttaggttggggtaaagctgtacctattcctcca
catccaatatacattccgccttctatgatggaacatacacttcccccacctccatccgga
ctgccttttaatgcgcagcctagagaacggttaaaaaaccccaatgctcccatgttacca
ccacctaaaaacaaggaggattttgagaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttgctcgccctgatacatcgaatgatagagtttgttgtacgt
gaagggccaatgtttgaagctatgattatgaacagagaaatcaacaatcctatgttcagg
ttcttatttgaaaaccagacacctgcccatgtttactacaggtggaagctttattccatt
ctgcagggagattctccaactaaatggcggacagaagattttcgtatgttcaaaaatgga
tctttttggaggccaccaccattaaatccataccttcatggaatgtcagaagaacaagaa
acagaagcttttgtagaggaacctagtaagaagggagcactcaaggaagaacagagggac
aaattagaagaaatcttacggggattaactccaagaaaaaatgatattggagatgcaatg
gtcttctgtcttaataatgctgaagctgctgaagaaatagtggattgcattactgaatca
ttgtctatcttaaagacacctcttcctaaaaagattgccagattatatttggtttctgat
gttttgtacaactcttcagccaaagttgccaatgcttcatattatagaaaattttttgaa
acaaagttatgtcagatattttcagacctcaatgctacctatcgtacaattcaaggccat
ttgcagtctgaaaactttaagcaacgggtaatgacctgcttcagagcatgggaagattgg
gcaatttatccagaaccatttttgatcaaactacagaatattttcttaggacttgtaaat
attattgaagaaaaggaaactgaggatgtaccagatgatcttgatggtgctcccattgaa
gaagagcttgatggtgcacctctagaagatgtggatggaattcccattgatgctactccc
attgatgatcttgatggagttcctataaaaagtcttgatgatgatctggatggagtgcct
ttggatgcaactgaagactcaaagaagaatgagcctatatttaaagttgccccgtcaaaa
tgggaagctgtagatgaatctgaattggaagcacaagctgtaacaacttctaagtgggag
ttatttgaccagcatgaagaatcagaagaagaagaaaatcaaaatcaagaagaagaaagt
gaagatgaagatgatacccaaagttccaaatctgaagagcatcacttgtactctaatcca
atcaaagaagaaatgaccgagtccaaattctctaaatactctgaaatgagtgaggaaaaa
cgagctaagcttcgtgagattgagctcaaagttatgaagtttcaggatgaattagagtct
ggaaaaagacctaaaaaaccaggccaaagtttccaagagcaagtagaacactacagagat
aaacttcttcaacgagagaaagagaaagaattagaaagagaacgagaaagagataagaag
gataaagaaaagttggaatctagatccaaagacaagaaggaaaaagatgagtgtactcca
acaaggaaagaaaggaaaaggcgacatagtacatcccccagcccatctcgcagtagcagt
ggtagacgagtgaaatccccatcaccaaaatcggagcggtcagagcgttcagaaagatct
cataaagaaagctcccggtccaggtcatctcacaaagattctcctagggatgttagcaaa
aaagccaaaagatcaccatctgggtcaaggacacctaaaaggtctaggcgatcacgatct
agatcccctaaaaaatcagggaagaaatccagatcccagtcccgatctccacacaggtct
cataaaaagtcaaagaaaaacaaacactga

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