Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101977476
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Entry
101977476 CDS
T10664
Symbol
Rin1
Name
(RefSeq) ras and Rab interactor 1
KO
K17638
Ras and Rab interactor 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
101977476 (Rin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101977476 (Rin1)
Membrane trafficking [BR:
iti04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101977476 (Rin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RIN1
SH2
RA
TetR_C_28
Motif
Other DBs
NCBI-GeneID:
101977476
NCBI-ProteinID:
XP_040140006
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MCGNVRRLCLGGWILFLSPREAKGAPSHGRRWAARNTSSQRPLPELHSWAPGERKVSEVE
GTARPAQDPLYDIPDTSRGQTGGPQQPARTVSLRERLLLTRPVWLQLRANAAAALHVLRT
EPPGTFLVRKSNTRQCQTLCVRLPEASGPSFVSSHYIQESSEGISLEGSDLLFPDLVQLI
CAYCHTRDILLLPLRLPRAIHQAATHKELEAISHLGIEFWSSSLNTKAPQGPPEGPPLPR
LKARSPQELDQGTGAALCFFNPLFPGDLGPTKRERFKRSFKVRVSTETSSPLSPPAVPPP
PVPVLPGANPSHTERLPPGRLLRRESSVGYRVPGGTSHVLPLLPSLQEVDCGSPSSSEEE
GPAGSRGSPMTSPGLGRRRPLLRSMSTAFCSLLAPERQVGRAAAVLMQDRHTAVGQLVQD
LLTQVRASPEPQELQGIRQALSRARAMLSAELGPEKLLPPERLEHILEKSLHRSVLKPLR
PILAARLRRRFSADGSLGRLAEGLRVARVQGPGAFASHLSLPSPAETEQVRQKLLQLLRT
YSPSAQVKRLLQACKLIYTALRTHVGEGAGADEFLPLLSLVLAQCDLPDLLLEAEYMSEL
LEPAVLTGEGGYYLTSLSASLTLLSSLGQAHTLPLNPSQELQRSLSLWEQRRLPSTLHFQ
HLLRVAYQDPGSGCTSKTLAVPPGASIATLNQLCATKFRVSQPDAFGLFLYKEQNYHRLQ
PGALAHKLPTDGYLVYRRAERPGTPGTAAEEAGSGQPVSGSQNEEKGVQGDEDVEARASP
RDSGGESETTAEGGEG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgggaatgtgcgccgcctgtgccttgggggctggattctcttcctgagtcccaga
gaagccaaaggagctcccagccatggaagacgctgggcagccaggaacacatcctctcag
agacccctgccggagcttcactcctgggcacctggagagagaaaagttagtgaagttgaa
gggacagccaggccagcccaggacccgctatatgacataccagacaccagccgggggcag
acaggtggaccccagcagccggcacgcactgtgagcctgcgggagcgcctgctgctcacc
cgacccgtgtggctgcagctgcgggccaatgcagcagctgcactgcatgtgctgaggacc
gagcccccagggacattcctggtgcggaaatcgaacactcgccagtgccagactctgtgc
gtgcggctaccagaggccagtggcccctctttcgtctccagccactacatccaggagagc
tctgagggcatctccttggagggctcagatctcctgttccccgatcttgttcagctcatc
tgtgcctactgccacacccgagacattcttctcctcccgctccggctccccagagccata
caccaggcagccacccacaaggagctggaggctatctcccatctgggcattgagttctgg
agctcctctctcaacaccaaggctccgcagggcccacctgaaggcccacccctgcccagg
ctgaaggcccgatcccctcaggagctggaccagggcactggcgctgccctctgtttcttc
aaccccctgttcccaggagacctgggccccaccaagcgagagagattcaagaggagcttc
aaagtgcgggtgtccacagagacctctagtcccctgtcaccacctgctgtgccacctccc
ccagtccctgtgctgccaggggccaaccccagtcacacagaaaggctgccccctgggcgg
cttctgagaagggagagctcagtggggtaccgtgtgcctggaggcaccagccatgtcctc
ccactcctgccctccctccaggaggtggactgtggctctcccagcagctctgaggaagag
gggccagctgggtccagggggagtcccatgacatcccctggccttggccgccgcaggcct
ctgctccggtccatgagcactgctttctgctccctgctggctccggagcggcaggtgggc
cgagcagctgcagtgttgatgcaggacagacacacagctgtgggccagttggtgcaggac
ctactgacccaggtgcgggccagcccggagccccaagagctgcagggcatccgccaggca
ctgagccgggcccgggccatgctgagcgcagagctgggccctgagaagctgctaccgcca
gagaggctggaacacatcctggagaagtccctgcatcgctcagtgctcaagcctctccgg
cccatcctggcagcccgcctgcggcgccggttttctgcagatggctcccttggccgcctg
gctgagggcctccgtgtggcccgagtgcaaggccctggagccttcgcgtcccacctgagc
ctgccctccccggcggagaccgagcaggtgcgccagaagctgctgcagctgctccgcacc
tactcacccagtgcccaggtgaagcggctcttgcaggcctgcaagttgatctacacggcc
ctgaggacccacgtgggggagggcgcaggcgcagatgaattcctgcctctgctgagcctt
gtcttggcccagtgtgaccttcctgacctcctgctagaagccgagtacatgtcggagctg
ctggagccagctgtgctcactggagagggtggctactaccttaccagcctgtcggccagt
ctgaccctgctgagcagcctaggccaggcccacaccctccccctcaacccctcccaggag
ctgcagcgctccctgagcctctgggagcagcgccgcctgccttccaccctccacttccag
cacctccttcgagtagcctaccaggatcctggcagcggttgtacctccaagactctagct
gtgcctcctggggcctcaatcgccaccctgaaccagctctgtgccactaagtttcgagtc
agccagccagatgcttttggcctattcctgtacaaggagcagaactaccatcgcctgcag
cctggagccctggcccacaagcttcccacagatggctatctggtctaccgccgggcagag
cggcctgggaccccagggactgcagcagaggaggcaggcagtgggcagccagtgtcaggt
agccagaatgaggagaagggggtgcagggagatgaggatgtggaagccagagccagcccc
agggacagtgggggagagtcagagacaactgctgagggaggagagggttag
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