Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101977503
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Entry
101977503 CDS
T10664
Symbol
Clcn5
Name
(RefSeq) H(+)/Cl(-) exchange transporter 5 isoform X1
KO
K05012
chloride channel 3/4/5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
101977503 (Clcn5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
iti04040
]
101977503 (Clcn5)
Ion channels [BR:
iti04040
]
Chloride channels
Chloride channel (CLC)
101977503 (Clcn5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
101977503
NCBI-ProteinID:
XP_005338751
UniProt:
I3MKY0
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All DBs
Position
X:35203152..35361974
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AA seq
816 aa
AA seq
DB search
MAMWQGAMDNRGFQQGSFSSFQSSSSDEDLMDIPGTAMDFSLRDDVPPLDREIEGNKSYN
GGGIGSSNRIMDFLEEPIPGVGTYDDFNTIDWVREKSRDRDRHREITNKSKESTWALIHS
VSDAFSGWLLMLLIGLLSGSLAGLIDISAHWMTDLKEGICTGGFWFNHEHCCWNSEHVTF
EDRDKCPEWNSWSQLIINTDEGAFAYIVNYFMYVLWALLFAFLAVSLVKVFAPYACGSGI
PEIKTILSGFIIRGYLGKWTLVIKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCHCFN
KYRKNEAKRREVLSAAAAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAF
TLRSINPFGNSRLVLFYVEFHTPWHLFELVPFILLGIFGGLWGALFIRTNIAWCRKRKTT
QLGKYPVIEVLIVTAITAILAFPNEYTRMSTSELISELFNDCGLLDSSKLCDYENRFNTS
KGGELPDRPAGVGVYSAMWQLALTLILKIVITIFTFGMKIPSGLFIPSMAVGAIAGRLLG
VGMEQLAYYHHDWTIFNSWCSQGADCITPGLYAMVGAAACLGGVTRMTVSLVVIMFELTG
GLEYIVPLMAAAMTSKWVADALGREGIYDAHIRLNGYPFLEAKEEFAHKTLAMDVMKPRR
NDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKK
QDGVVSTSIIYFTEHSPPMPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQ
CLVTHNGRLLGIITKKDVLKHIAQMANQDPDSILFN
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtggcagggagccatggataacagaggttttcagcaggggagttttagtagc
ttccagagcagctccagcgatgaagacttgatggacataccaggaacagctatggatttc
tccttgagagatgatgttcctcctttagaccgagaaatagaagggaacaagtcatacaat
ggtggaggaataggttcttcaaataggatcatggacttcttggaggagccaataccaggt
gtaggtacctatgatgatttcaacacaattgattgggtgagagagaagtctcgagaccgg
gatagacaccgagagatcaccaataaaagcaaagagtcaacatgggccttaattcacagt
gtgagtgatgcattttctggctggttgttgatgctccttattggacttttatcaggttcc
ttagctggtctgatagacatctctgctcattggatgacagacttaaaagaaggcatatgc
acaggagggttctggtttaaccatgaacactgttgctggaactctgaacatgtcaccttt
gaagacagagacaagtgtccagagtggaatagttggtcccaacttatcatcaacacagat
gagggggcctttgcctacatagtcaattatttcatgtatgtcctctgggctctcctattt
gccttccttgctgtatctcttgtcaaggtgtttgccccttatgcctgtggctctggaatt
cctgagataaaaactatcttgagtggtttcattattaggggctatttgggtaagtggacc
ctggttatcaaaaccatcaccttggtgctggcagtgtcctctggcttgagcctgggcaaa
gagggccccctagtgcacgtggcttgctgctgtgggaacatcctttgccactgcttcaac
aaatacaggaagaatgaagccaaacgcagagaggtcttgtcagctgcagctgctgctggt
gtgtctgtagcttttggggcacctatcggaggagtgttattcagtctggaagaggtcagc
tactattttcccctcaaaactttgtggcgttcattctttgctgccctggtggcagcattt
actctacgctccatcaatccgtttgggaacagccgcctagttctgttttatgtggagttt
cacaccccatggcatctctttgagcttgtaccattcattctgctgggcatatttggtggt
ctgtggggagctctgtttatccgcacaaacattgcctggtgtcggaagcgtaagaccact
cagttgggcaagtatcccgtcatagaggtactcatcgtgacagccatcactgccatcctg
gctttccccaatgaatatacccgaatgagtacaagtgagctcatttctgagctgttcaat
gactgtggccttctggactcctccaagctgtgtgattatgagaaccgttttaacacaagc
aagggcggtgaactgcctgacagaccggctggcgtgggagtctacagtgccatgtggcag
ctggctttgacactcatcctgaaaattgtcattactatattcacctttggcatgaagatc
ccttctggcctctttatccctagcatggctgttggtgctatagcaggtcggcttttagga
gtaggaatggaacaactggcttattaccaccatgactggacaatctttaatagttggtgt
agtcagggagctgattgcatcacccctggtctttatgcgatggttggggctgctgcctgc
ttagggggtgtgactcggatgactgtttctcttgttgtcataatgtttgaactgactggc
ggcttggaatatattgtgcctctgatggctgcagccatgacaagcaagtgggtggcagat
gcacttggacgggagggcatttatgacgcccatatccgtctcaacggatacccctttctt
gaagccaaagaagagtttgctcataagaccctggcaatggatgtgatgaaaccccggaga
aatgatcctttgttgactgtcctgactcaggacagtatgactgtggaagatgtagaaacc
ataatcagtgaaaccacttacagtggcttcccagtggtggtgtcccgggagtctcaaaga
cttgtaggctttgtcctccgaagagatctcattatttcaattgaaaatgctcggaagaaa
caggatggagttgtgagcacttccatcatttatttcactgagcattctcctccaatgcca
ccatacactccacctaccctgaagcttcggaacatcctggatctcagccccttcactgtg
actgacctgacacccatggagatcgtagtggatatcttccgcaagctgggattgcgacag
tgcctggttacacacaatgggcgtttgcttggaatcattaccaaaaaggatgtgttaaag
catatagcacagatggcgaatcaagatcctgattccattctcttcaactag
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