Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101977932
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Entry
101977932 CDS
T10664
Symbol
Farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101977932 (Farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
iti01007
]
101977932 (Farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iti03016
]
101977932 (Farsb)
Enzymes [BR:
iti01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
101977932 (Farsb)
Amino acid related enzymes [BR:
iti01007
]
Aminoacyl-tRNA synthetase
Class II (U)
101977932 (Farsb)
Transfer RNA biogenesis [BR:
iti03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101977932 (Farsb)
Prokaryotic type
101977932 (Farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
101977932
NCBI-ProteinID:
XP_005330594
UniProt:
I3MR15
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MPTVSVKRDLLFKALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAEGASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPNGEIQKLIVTEETAKIRPF
AVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSD
IKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGN
HSKITVNTRNVFIECTGTDFTKAKIVLDIIVTMFSEYCENQFMVEAAEVVFPNGKSNTFP
ELGYRKEIVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIH
ACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQ
EDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI
VVKDSTKDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPTKDKGGYMIKASEG
PAFFPGRCAEIFARGQSIGKLGVLHPDVITKFELTMPCSSLEINIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagcgtgaagcgcgatctgctcttcaaagctctgggacggacctacact
gacgaagaatttgatgaactatgttttgaatttggtctggaacttgatgaaattacatct
gaaaaggaaataataagtaaggaacaaggtaatgtgaaggcagagggggcctctgatgtt
gttctttacaaaatcgacgttcctgccaatagatatgatctcctgtgtctggaaggattg
gttcgagggcttcaggtcttcaaagaaaggataaaagctccagtatataaacgggtaatg
cctaatggagaaattcaaaaactgattgtcacagaagagacagctaaaatacgccctttt
gcagtcgcagcagttctccggaatattaagtttactaaagatcgatatgacagcttcatt
gaacttcaagagaaattacatcagaatatttgcaggaaaagagcattggttgccattggt
actcatgatttggacactttatcaggccctttcacctacactgcaaagcgtccttcagat
atcaaattcaagcctctgaataagactaaggagtatacagcctgtgaattaatgaacata
tacaagactgacaaccaccttaaacattacttgcatatcattgaaaataaacctctgtac
ccagttatctatgatagcaatggtgtcgtcctttcaatgcctccaatcatcaatgggaat
cattccaaaataacagtaaatactagaaatgtatttatcgaatgcacaggaactgacttt
actaaggcaaaaatagttcttgatattattgtcaccatgttcagtgaatattgtgaaaat
caattcatggttgaagcagctgaggtagtttttcctaatgggaagtcaaatacttttcca
gaattgggttaccgaaaggagatagttagagctgatcttattaacaagaaagttggaatc
agagaaactccggaaaatcttgccaagctcctgaccaggatgtatttaaagtcagaagtc
ataggtgatgggaatcagattgagattgaaatccctccaaccagagctgacattatccat
gcgtgtgatattgtagaagatgcagctattgcttatggatataacaacattcagatgact
ctcccgaaaacatacaccatagctaatcaatttcctcttaataagctcactgaacttctc
agacatgacatggcagcagctggattcactgaagcacttacctttgctctgtgctcccaa
gaagatattgctgataaacttggtttggatatctctgcaacaaaggcagtccacataagt
aaccctaaaacagctgagtttcaggtggcacgcactacccttcttcctggcctcttaaag
accatagcagcaaatcggaagatgcctcttcctctgaaactgtttgaaatctctgacatt
gtagtaaaagattctaccaaagatgtaggggcaaaaaactacaggcatctctgtgctgtt
tattacaacaagaatcctgggtttgagataatccatgggctgctggacagaattatgcag
ctgctcgatgtacctcctaccaaagataagggaggctacatgataaaagcgtcagaaggc
cctgctttcttccctggacgatgtgccgagatctttgccaggggtcaaagcattgggaag
ctcggagtccttcatcctgatgttatcaccaaatttgagctgaccatgccctgctcctcc
ctggaaatcaatattgagccttttttgtga
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